| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 389,898 | Δ9,908 bp | yaiT–[yaiZ] | yaiT, insF‑2, insE‑2, yaiT, iprA, ampH, sbmA, yaiW, yaiY, [yaiZ] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 389898 | 399805 | 9908 | 35 [0] | [0] 36 | yaiT–[yaiZ] | yaiT,insF‑2,insE‑2,yaiT,iprA,ampH,sbmA,yaiW,yaiY,[yaiZ] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 389897 | 0 (0.000) | 34 (1.240) | 27/98 | 0.0 | 100% | intergenic (‑170/‑354) | hemB/yaiT | porphobilinogen synthase/putative autotransporter YaiT |
| ? | NC_000913 | 399806 = | 0 (0.000) | intergenic (+1/+23) | yaiZ/ddlA | DUF2754 domain‑containing protein YaiZ/D‑alanine‑‑D‑alanine ligase A | |||||
AATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/389850‑389897‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGTTAT > NC_000913/399806‑399854 AATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTG < 1:90904/49‑1AATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTG < 1:261165/49‑1AATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTG > 1:1405603/1‑49 ATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAA < 1:2060538/50‑1 ATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAA < 1:950141/50‑1 ATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAA < 1:1823132/50‑1 AAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATT < 1:1651000/50‑1 AAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATAT > 1:759046/1‑49 AAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATAT > 1:2258438/1‑49 AACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTA > 1:1704536/1‑50 AACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTA < 1:2013799/50‑1 AGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCG > 1:527297/1‑50 GCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGG < 1:1708058/50‑1 GCAATAATTTTATATTCACTGAAAATATTTTAAATCTTGAATATTATCGG > 1:833417/1‑50 CAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGG > 1:1184683/1‑50 ATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTT > 1:1466147/1‑49 TATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAA > 1:813666/1‑49 TATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATAT < 1:1278072/50‑1 TATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATAT < 1:871054/50‑1 TATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATA < 1:549801/49‑1 ATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATAT > 1:1720946/1‑49 TTCACTGAAAATATTTTAAATCGTGAATATTATCGGGCGTTAAAATATT < 1:1186144/49‑1 TCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTA > 1:870254/1‑49 CACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTAC < 1:380664/49‑1 ACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACAT < 1:1300480/50‑1 ACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACA < 1:701571/49‑1 AAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTG < 1:1940556/50‑1 ATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTT < 1:1182154/50‑1 TTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTT > 1:1262517/1‑49 TTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAAT > 1:2089061/1‑50 TCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGT > 1:722589/1‑50 TCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGT > 1:779127/1‑50 TCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGT > 1:1716422/1‑50 TGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGTTAT > 1:1053075/1‑50 AATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/389850‑389897‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGTTAT > NC_000913/399806‑399854 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |