| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 729,365 | Δ9,598 bp | rhsC–ybfD | rhsC, ybfB, ybfO, ybfC, ybfQ, ybfL, ybfD | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 729365 | 738962 | 9598 | 34 [0] | [0] 34 | rhsC–ybfD | rhsC,ybfB,ybfO,ybfC,ybfQ,ybfL,ybfD |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 729364 | 0 (0.000) | 31 (1.180) | 23/94 | 0.0 | 100% | intergenic (+24/‑219) | ybfA/rhsC | DUF2517 domain‑containing protein YbfA/rhs element protein RhsC |
| ? | NC_000913 | 738963 = | 0 (0.000) | intergenic (+110/‑38) | ybfD/ybgA | H repeat‑associated putative transposase YbfD/DUF1722 domain‑containing protein YbgA | |||||
GAAAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/729314‑729364‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTACA > NC_000913/738963‑739011 GAAAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGA < 1:190557/50‑1GAAAAGGCAACTGGTGATTTTTATTGACTGCTGAGTTTTGAATACATTGA < 1:1429196/50‑1 AAAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAA > 1:1984644/1‑50 AAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAC < 1:1920769/50‑1 AAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACG > 1:2061980/1‑50 GCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCT < 1:1372138/50‑1 GCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCT < 1:949212/50‑1 CAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTA < 1:574244/50‑1 AACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTAC < 1:1147903/50‑1 AACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTAC < 1:1317554/50‑1 AACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTAC < 1:1938218/50‑1 GTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTT < 1:240364/49‑1 GTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACT < 1:68475/48‑1 TTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTG > 1:975697/1‑50 TTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTG < 1:1373211/49‑1 TTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTG < 1:2260612/49‑1 TATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGT > 1:1387242/1‑49 TATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGT > 1:1371695/1‑49 TATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGT < 1:851575/49‑1 ATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTA < 1:1721432/49‑1 ATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCG > 1:1517632/1‑50 TGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCT > 1:191295/1‑50 TGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCT > 1:621424/1‑50 TGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCT > 1:2073332/1‑50 CTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCT > 1:1376005/1‑48 GTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAG > 1:1870837/1‑50 TTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAG > 1:2100544/1‑48 TGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAG > 1:605136/1‑49 AATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAA > 1:117362/1‑50 AATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAA > 1:740551/1‑50 ATACATTGAACGTCTACACTTACTCCTGTAATCCGCTCAGGAGCAGTAAT < 1:2012833/50‑1 CATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGA < 1:990385/49‑1 ATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAAT > 1:1526757/1‑50 TGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATC > 1:1694864/1‑49 ACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTACA < 1:1173307/50‑1 ACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTAC > 1:2242375/1‑49 GAAAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/729314‑729364‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTACA > NC_000913/738963‑739011 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |