Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 1,400,325 Δ81,931 bp [abgT]–[azoR] 87 genes

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 1400325 1482255 81931 20 [0] [0] 21 [abgT]–[azoR] [abgT],abgB,abgA,abgR,mcaS,smrA,dgcM,zntB,fnrS,ynaL,dbpA,ttcA,intR,xisR,rcbA,ralA,ralR,recT,recE,racC,ydaE,kilR,sieB,ydaF,ydaG,racR,ydaS,ydaT,ydaU,ydaV,ydaW,rzpR,rzoR,trkG,ynaK,ydaY,ynaA,lomR,insH‑5,lomR,stfR,tfaR,pinR,ynaE,ynaM,ttcC,uspF,ompN,micC,ydbK,ydbJ,hslJ,ldhA,ydbH,ynbE,ydbL,feaR,feaB,tynA,paaZ,paaA,paaB,paaC,paaD,paaE,paaF,paaG,paaH,paaI,paaJ,paaK,paaX,paaY,ynbG,ydbA,insD‑2,insC‑2,ydbA,insI‑2,ydbA,pdxI,ydbD,ynbA,ynbB,ynbC,ynbD,[azoR]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 14003240 (0.000)19 (0.690) 15/98 0.4 100% coding (1450/1527 nt) abgT p‑aminobenzoyl glutamate:H(+) symporter
?NC_000913 1482256 = 0 (0.000)coding (605/606 nt) azoR FMN dependent NADH:quinone oxidoreductase

‑CCTATCGGCAGACCGACAAGATACCACGCCAGCAACATCAGCAGCCATAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1400275‑1400324
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TATGCAGAAACAATGCTGTCGATGGCTGCTTTTGCGTCAGACTGT  >  NC_000913/1482256‑1482300
                                                                                                
aCCTATCGGCAGACCGACAAGATACCACGCCAGC‑ACATC‑GCAGCCATACT                                              <  1:1036789/49‑1
aCCTATCGGCAGACCGACAAGATACCACGCCAGC‑ACATC‑GCAGCCATACT                                              <  1:557556/49‑1
aCCTATCGGCAGACCGACAAGATACCACGCCAGC‑ACATC‑GCAGCCATACT                                              <  1:2303709/49‑1
    ATCGGCAGACCGACAAGATACCACGCCAGC‑ACATC‑GCAGCCATACTATG                                           >  1:1991921/1‑49
     TCGGCAGACCGACAAGATACCACGCCAGC‑ACATC‑GCAGCCATACTATG                                           <  1:1169553/48‑1
     TCGGCAGACCGACAAGATACCACGCCAGC‑ACATC‑GCAGCCATACTATG                                           <  1:2248131/48‑1
      CGGCAGACCGACAAGATACCACGCCAGC‑ACATC‑GCAGCCATACTATG                                           >  1:894659/1‑47
       GGCAGACCGACAAGATACCACGCCAGC‑ACATC‑GCAGCCATACTATGCAG                                        >  1:766108/1‑49
                   AGATACCACGCCAGC‑ACGTC‑GCAGCCATACTATGCAGAAACAATGCTGTC                           <  1:2025903/50‑1
                    GATACCACGCCAGC‑ACATC‑GCAGCCATACTATGCAGAAACAATGCTGTCG                          <  1:1935905/50‑1
                     ATACCACGCCAGC‑ACATC‑GCAGCCATACTATGCAGAAACAATGCTGTCGA                         >  1:2312800/1‑50
                     ATACCACGCCAGC‑ACATC‑GCAGCCATACTATGCAGAAACAATGCTGTCGA                         <  1:338318/50‑1
                      TACCACGCCAGC‑ACATC‑GCAGCCATACTATGCAGAAACAATGCTGTCGAT                        <  1:210016/50‑1
                          ACGCCAGC‑ACATC‑GCAGCCATACTATGCAGAAACAATGCTGTCGATGGCT                    >  1:1733784/1‑50
                            GCCAGC‑ACATC‑GCAGCCATACTATGCAGAAACAATGCTGTCGATGGCTGC                  >  1:1195258/1‑50
                                         GCAGCCATACTATGCAGAAACAATGCTGTCGATGGCTGCTTTTGCGTCAG       <  1:1784748/50‑1
                                           AGCCATACTATGCAGAAACAATGCTGTCGATGGCTGCTTTTGCGTCAGAC     <  1:1015251/50‑1
                                             CCATACTATGCAGAAACAATGCTGTCGATGGCTGCTTTTGCGTCAGACTG   <  1:422621/50‑1
                                              CATACTATGCAGAAACAATGCTGTCGATGGCTGCTTTTGCGTCAGACTGT  >  1:1974845/1‑50
                                                                                                
‑CCTATCGGCAGACCGACAAGATACCACGCCAGCAACATCAGCAGCCATAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1400275‑1400324
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TATGCAGAAACAATGCTGTCGATGGCTGCTTTTGCGTCAGACTGT  >  NC_000913/1482256‑1482300

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.