| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,165,151 | Δ12,060 bp | yegP–gatY | 17 genes yegP, yegQ, cyaR, ogrK, yegZ, yegR, yegS, gatR, insE‑5, insF‑5, gatR, gatD, gatC, gatB, gatA, gatZ, gatY |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2165151 | 2177210 | 12060 | 38 [0] | [0] 38 | yegP–gatY | yegP,yegQ,cyaR,ogrK,yegZ,yegR,yegS,gatR,insE‑5,insF‑5,gatR,gatD,gatC,gatB,gatA,gatZ,gatY |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2165150 | 0 (0.000) | 38 (1.390) | 25/98 | 0.0 | 100% | intergenic (+152/‑39) | baeR/yegP | DNA‑binding transcriptional activator BaeR/DUF1508 domain‑containing protein YegP |
| ? | NC_000913 | 2177211 = | 0 (0.000) | intergenic (‑7/+301) | gatY/fbaB | tagatose‑1,6‑bisphosphate aldolase 2 subunit GatY/fructose‑bisphosphate aldolase class I | |||||
AGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2165102‑2165150‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTT > NC_000913/2177211‑2177258 AGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAA < 1:1040758/50‑1 GCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATC < 1:86570/50‑1 ATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCT < 1:1228199/50‑1 ATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCT > 1:1910995/1‑50 TCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTG < 1:1559666/50‑1 CAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGT > 1:830723/1‑50 CAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGT > 1:142064/1‑50 AGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTC < 1:535200/50‑1 AGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTC < 1:1613735/50‑1 AGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTC < 1:1686308/50‑1 ATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTgg < 1:654660/50‑3 GCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTT < 1:2278969/49‑1 GCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTT < 1:423624/49‑1 CATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTC > 1:3864/1‑49 ATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCG < 1:169741/49‑1 ATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCG < 1:630773/49‑1 TAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCA < 1:1705031/49‑1 TAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCA < 1:500356/49‑1 TAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTC < 1:339349/48‑1 TAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTC < 1:2088399/48‑1 AATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAA < 1:881640/49‑1 AATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAA < 1:2076527/49‑1 TCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAAT < 1:370296/50‑1 TAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAA > 1:1847265/1‑50 CAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGA > 1:1957334/1‑49 GCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAAT < 1:1863883/50‑1 CACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATT < 1:2136779/50‑1 CACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATT < 1:1536636/50‑1 CACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAAT > 1:1108860/1‑49 CCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTAT < 1:1242808/50‑1 TAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGT > 1:438202/1‑50 TAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTG < 1:512281/49‑1 TAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTG < 1:522384/49‑1 TAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTT < 1:428257/48‑1 TAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTT < 1:110041/48‑1 AGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGT < 1:1479118/49‑1 GAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTT < 1:2316548/50‑1 GAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTT < 1:553282/50‑1 AGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2165102‑2165150‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTT > NC_000913/2177211‑2177258 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |