| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,651,293 | Δ2,422 bp | [yhiS]–yhiS | [yhiS], insH‑11, yhiS | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3651293 | 3653714 | 2422 | 50 [0] | [0] 50 | [yhiS]–yhiS | [yhiS],insH‑11,yhiS |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3651292 | 0 (0.000) | 45 (1.710) | 40/94 | 0.0 | 100% | pseudogene (2/746 nt) | yhiS | putative uncharacterized protein YhiS |
| ? | NC_000913 | 3653715 = | 0 (0.000) | intergenic (+2/‑246) | yhiS/slp | putative uncharacterized protein YhiS/starvation lipoprotein | |||||
ATCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3651242‑3651292‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTA > NC_000913/3653715‑3653763 ATCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTA > 1:1687819/1‑50 TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTAT < 1:1920335/50‑1 CAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATAT < 1:2059721/50‑1 CAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATAT < 1:1747754/50‑1 AATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATT > 1:1344927/1‑50 TTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGAT > 1:631529/1‑50 TAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGAT > 1:2200654/1‑49 TAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGAT < 1:1649973/49‑1 AAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTA > 1:1303747/1‑50 AAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATT < 1:445268/49‑1 AACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTAT < 1:562814/50‑1 ACATCTTAGCATAAAGCAAATGATGAATAAGGAATTTTATATTGATTATT < 1:2292649/50‑1 ATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAG < 1:1908395/50‑1 TTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCAC > 1:1593356/1‑50 AGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCA < 1:177604/47‑1 GCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTT < 1:924613/50‑1 CATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTA > 1:505360/1‑50 CATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTA > 1:2204117/1‑50 TAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATA < 1:864606/50‑1 AAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAA > 1:704459/1‑50 AAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAAT < 1:2345683/50‑1 AAACAAAGGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAA < 1:215881/49‑1 AACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAAT > 1:1302502/1‑49 ACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCA > 1:1812873/1‑50 CAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCAT < 1:627977/50‑1 AAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATT > 1:1217642/1‑50 AATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTG < 1:667681/50‑1 TGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAA < 1:699919/50‑1 ATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAAT < 1:1478136/49‑1 TGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAA < 1:90184/50‑1 TGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATA > 1:2185989/1‑49 GAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAA > 1:107381/1‑49 AATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAA > 1:2062201/1‑49 AATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAA < 1:2222586/49‑1 AATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAA > 1:856596/1‑49 ATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA < 1:1874719/50‑1 ATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA > 1:1509039/1‑50 ATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA > 1:480542/1‑50 TAAGGAATTTTATATTGATTATTATCACTTTATAATCATTTAATAAAAAT < 1:287867/50‑1 TAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAAT < 1:1397662/50‑1 TAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA > 1:1424471/1‑49 AGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA > 1:955955/1‑47 GGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA > 1:26780/1‑46 AATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATT > 1:2293942/1‑50 ATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTT > 1:1826890/1‑50 TTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTT > 1:81731/1‑49 TTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTAT > 1:233615/1‑50 ATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATG > 1:1140056/1‑49 TATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTA < 1:412794/50‑1 TATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTA > 1:277424/1‑50 TATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTA < 1:1579031/50‑1 ATCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3651242‑3651292‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTA > NC_000913/3653715‑3653763 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |