| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,720,634 | Δ1,442 bp | IS150‑mediated | insJ–insK | insJ, insK |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3720634 | 3722075 | 1442 | 53 [0] | [0] 50 | insJ–insK | insJ,insK |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3720633 | 0 (0.000) | 50 (1.820) | 35/98 | 0.0 | 100% | noncoding (1/1443 nt) | IS150 | repeat region |
| ? | NC_000913 | 3722076 = | 0 (0.000) | intergenic (+27/+252) | insK/glyS | IS150 conserved protein InsB/glycine‑‑tRNA ligase subunit beta | |||||
ATATTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3720586‑3720633‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTG > NC_000913/3722076‑3722124 ATATTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAAC > 1:939746/1‑50ATATTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAAC > 1:890584/1‑50 TATTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAA < 1:933878/48‑1 ATTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTT > 1:210203/1‑50 TTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTT < 1:2223688/50‑1 TTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTT < 1:585513/50‑1 TTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTT > 1:1491990/1‑50 TCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTG < 1:429848/49‑1 TCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTG < 1:787128/49‑1 cGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTT < 1:1882931/48‑1 cGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTT < 1:517217/48‑1 cGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGAT < 1:1294398/46‑1 GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTAT < 1:934249/50‑1 GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTAT < 1:489218/50‑1 CATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATA < 1:686361/50‑1 ATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAG < 1:929007/50‑1 ATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAG < 1:475181/50‑1 TTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGT > 1:1227010/1‑50 TTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGT < 1:2133200/50‑1 CCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTC < 1:12130/49‑1 CCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAG < 1:1004928/50‑1 CCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAG > 1:602913/1‑50 CCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAG > 1:743953/1‑50 CCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAG < 1:184781/50‑1 AGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGT > 1:2000370/1‑50 AGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGT < 1:1115697/50‑1 GCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTG > 1:351881/1‑50 CTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGG > 1:1307869/1‑50 CTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGG > 1:822774/1‑50 CTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCT < 1:2016022/50‑1 TGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTT < 1:853024/50‑1 TGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTT < 1:1002365/48‑1 TTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCT < 1:410346/50‑1 TTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTC < 1:1974057/49‑1 GATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCT > 1:1870706/1‑50 TTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGT > 1:925006/1‑50 CCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTG > 1:1671311/1‑50 CCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTG > 1:1819667/1‑50 CCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTG > 1:1151232/1‑50 CAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTG < 1:447710/49‑1 AACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCC > 1:2316467/1‑50 ACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCT < 1:261466/50‑1 ACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCT < 1:2029397/50‑1 CGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTT > 1:572803/1‑50 GAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTT < 1:2068541/50‑1 GAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTT > 1:455172/1‑50 GAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTT > 1:1315923/1‑50 AGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTC < 1:207716/50‑1 ATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGT > 1:122436/1‑50 TAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTG < 1:2006361/50‑1 ATATTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3720586‑3720633‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTG > NC_000913/3722076‑3722124 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |