| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 4,626,183 | (GCG)3→2 | coding (272‑274/1383 nt) | radA → | DNA recombination protein |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 4626176 | 4626178 | 3 | 32 [0] | [0] 31 | radA | DNA recombination protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4626179 = | 0 (0.000) | 25 (1.070) | 22/84 | 0.0 | 100% | coding (268/1383 nt) | radA | DNA recombination protein |
| ? | NC_000913 | = 4626175 | 0 (0.000) | coding (264/1383 nt) | radA | DNA recombination protein | |||||
TCCCCGCACCAGGGTTACCGCCAATCAGAATGGCACTTCCTGGCACCACGCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4626233‑4626179‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgccTAGTACGCGGTCGAACTCTTTAAATCCGGTGGAAAAACGCGGCAGCTCT < NC_000913/4626175‑4626127 TCCCCGCACCAGGGTTACCGCCAATCAGAATGGCACTTCCTGGCACCAC < 1:2271048/49‑1 CCGCACCAGGGTTACCGCCAATCAGAATGGCACTTCCTGGCACCACGCCG > 1:527832/1‑50 CCGCACCAGGGTTACCGCCAATCAGAATGGCACTTCCTGGCACCACGCCG > 1:1465644/1‑50 CGCACCAGGGTTACCGCCAATCAGAATGGCACTTCCTGGCACCACGCCGC < 1:738623/50‑1 CACCAGGGTTACCGCCAATCAGAATGGCACTTCCTGGCACCACGCCGCCT < 1:691228/50‑1 CCAGGGTTACCGCCAATCAGAATGGCACTTCCTGGCACCACGCCGCCTAG > 1:1354650/1‑50 AGGGTTACCGCCAATCAGAATGGCACTTCCTGGCACCACGCCGCCTAGTA < 1:1198620/50‑1 AGGGTGACCGCCAATCAGAATGGCACTTCCTGGCACCACGCCGCCTAGTA < 1:1922647/50‑1 TACCGCCAATCAGAATGGCACTTCCTGGCACCACGCCGCCTAGTACGCGG > 1:1050134/1‑50 CCGCCAATCAGAATGGCACTTCCTGGCACCACGCCGCCTAGTACGCGGTC < 1:1598614/50‑1 CCGCCAATCAGAATGGCACTTCCTGGCACCACGCCGCCTAGTACGCGGTC > 1:1889717/1‑50 CGCCAATCAGAATGGCACTTCCTGGCACCACGCCGCCTAGTACGCGGTCG < 1:91574/50‑1 CAATCAGAATGGCACTTCCTGGCACCACGCCGCCTAGTACGCGGTCGAAC > 1:1895300/1‑50 AATCAGAATGGCACTTCCTGGCACCACGCCGCCTAGTACGCGGTCGAACT > 1:630553/1‑50 AGAATGGCACTTCCTGGCACCACGCCGCCTAGTACGCGGTCGAACTCTTT < 1:215773/50‑1 AGAATGGCACTTCCTGGCACCACGCCGCCTAGTACGCGGTCGAACTCTT > 1:160106/1‑49 AGAATGGCACTTCCTGGCACCACGCCGCCTAGTACGCGGTCGAACTCTT > 1:1432258/1‑49 AATGGCACTTCCTGGCACCACGCCGCCTAGTACGCGGTCGAACTCTTTA > 1:894684/1‑49 GGCACTTCCTGGCACCACGCCGCCTAGTACGCGGTCGAACTCTTTAAATC > 1:1631401/1‑50 GCACTTCCTGGCACCACGCCGCCTAGTACGCGGTCGAACTCTTTAAATC < 1:659939/49‑1 TCCTGGCACCACGCCGCCTAGTACGCGGTCGAACTCTTTAAATCCGGTG > 1:2246972/1‑49 CCTGGCACCACGCCGCCTAGTACGCGGTCGAACTCTTTAAATCCGGTGG < 1:1348415/49‑1 CTGGCACCACGCCGCCTAGTACGCGGTCGAACTCTTTAAATCCGGTGGAA < 1:314412/50‑1 CTGGCACCACGCCGCCTAGTACGCGGTCGAACTCTTTAAATCCGGTGGA > 1:2168910/1‑49 TGGCACCACGCCGCCTAGTACGCGGTCGAACTCTTTAAATCCGGTGGAA > 1:1302005/1‑49 GCACCACGCCGCCTAGTACGCGGTCGAACTCTTTAAATCCGGTGGAAA < 1:1189002/48‑1 GCACCACGCCGCCTAGTACGCGGTCGAACTCTTTAAATCCGGTGGAAA < 1:357300/48‑1 ACCACGCCGCCTAGTACGCGGTCGAACTCTTTAAATCCGGTGGAAAAACG < 1:775956/50‑1 CACGCCGCCTAGTACGCGGTCGAACTCTTTAAATCCGGTGGAAAAACGCG > 1:608868/1‑50 CGCCGCCTAGTACGCGGTCGAACTCTTTAAATCCGGTGGAAAAACGCGGC < 1:404687/50‑1 GCCGCCTAGTACGCGGTCGAACTCTTTAAATCCGGTGGAAAAACGCGG > 1:34223/1‑48 GCCTAGTACGCGGTCGATCTCTTTAAATCCGGTGGAAAAACGCGGCAGCT < 1:2084076/50‑1 GCCTAGTACGCGGTCGAACTCTTTAAATCCGGTGGAAAAACGCGGCAGCT < 1:167141/50‑1 CTAGTACGCGGTCGAACTCTTTAAATCCGGTGGAAAAACGCGGCAGCTCT < 1:1784916/50‑1 CTAGTACGCGGTCGAACTCTTTAAATCCGGTGGAAAAACGCGGCAGCTCT > 1:1432982/1‑50 TCCCCGCACCAGGGTTACCGCCAATCAGAATGGCACTTCCTGGCACCACGCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4626233‑4626179‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgccTAGTACGCGGTCGAACTCTTTAAATCCGGTGGAAAAACGCGGCAGCTCT < NC_000913/4626175‑4626127 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |