| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2066304 | NA (NA) | 23 (0.840) | 21/98 | 0.1 | 100% | noncoding (1050/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 2080592 = | 0 (0.000) | intergenic (‑1/+197) | yeeA/sbmC | putative transporter YeeA/DNA gyrase inhibitor | |||||
GCGGTATACCCGGATTTCAAACGGGCTTAATGACTTATCGGCACGCACGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTC > NC_000913/2080544‑2080637 | agcctatttagaccgtttcttcgccatttaaggcgttatccccagtttg > 1:1304902‑M2/49‑49 (MQ=255)agcctatttagaccgtttcttcgccatttaaggcgttatccccagtttGc < 1:2208959‑M2/2‑1 (MQ=255) atttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGaaa > 1:2108824‑M2/44‑50 (MQ=255) gaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTcc < 1:1636501‑M2/11‑1 (MQ=255) ccgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTa < 1:1206726‑M2/14‑1 (MQ=255) gtttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAAt > 1:206577‑M2/35‑50 (MQ=255) tcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATga < 1:2318548‑M2/18‑1 (MQ=255) cgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATgaga < 1:1550231‑M2/20‑1 (MQ=255) cgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGAtt < 1:1852981‑M2/22‑1 (MQ=255) cgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGAtt < 1:1423180‑M2/22‑1 (MQ=255) catttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTaaaa < 1:1727448‑M2/26‑1 (MQ=255) catttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTaaaa < 1:2248328‑M2/26‑1 (MQ=255) catttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTaa > 1:1007515‑M2/25‑48 (MQ=255) atttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAg < 1:1225150‑M2/27‑1 (MQ=255) aggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCt > 1:2280357‑M2/19‑49 (MQ=255) aggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCt < 1:697165‑M2/31‑1 (MQ=255) aggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTc < 1:272697‑M2/32‑1 (MQ=255) gcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCAt < 1:1480525‑M2/34‑1 (MQ=255) gttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATaa > 1:2345028‑M2/15‑50 (MQ=255) tatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACt > 1:2202320‑M2/13‑50 (MQ=255) atccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACt < 1:1682528‑M2/38‑1 (MQ=255) cagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTg < 1:73358‑M2/44‑1 (MQ=255) gtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTc < 1:1331972‑M2/46‑1 (MQ=255) | GCGGTATACCCGGATTTCAAACGGGCTTAATGACTTATCGGCACGCACGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTC > NC_000913/2080544‑2080637 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |