| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 675,552 | Δ7,819 bp | ybeQ–[hscC] | ybeQ, ybeR, djlB, ybeT, ybeU, djlC, [hscC] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 675552 | 683370 | 7819 | 28 [0] | [0] 27 | ybeQ–[hscC] | ybeQ,ybeR,djlB,ybeT,ybeU,djlC,[hscC] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 675551 | 0 (0.000) | 27 (0.980) | 25/98 | 0.0 | 100% | intergenic (+51/+19) | ybeL/ybeQ | DUF1451 domain‑containing protein YbeL/Sel1 repeat‑containing protein YbeQ |
| ? | NC_000913 | 683371 = | 0 (0.000) | coding (23/1671 nt) | hscC | chaperone protein HscC | |||||
GTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAAT > NC_000913/675503‑675596 | gTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTccc < 1:2147410/49‑1 (MQ=255)gTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCa < 1:2197879‑M1/50‑2 (MQ=255) gATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggc > 1:1036952‑M1/1‑45 (MQ=255) aTTTCGCGCAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggc < 1:1711988‑M1/49‑6 (MQ=255) tCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgag < 1:1247557‑M1/49‑9 (MQ=255) gCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttc > 1:1233784‑M1/1‑39 (MQ=255) gCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagtt < 1:2041947‑M1/49‑11 (MQ=255) cacaGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttct < 1:698288‑M1/50‑13 (MQ=255) cacaGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttct < 1:1385953‑M1/50‑13 (MQ=255) aTAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttctgcattat < 1:868218‑M1/50‑20 (MQ=255) aaGAGAATATGGGCCGAATGAAATTCCCatggcgagttctgcattatcca < 1:1900463‑M1/50‑23 (MQ=255) agagAATATGGGCCGAATGAAATTCCCatggcgagttctgcattatccat < 1:1400680‑M1/50‑24 (MQ=255) agagAATATGGGCCGAATGAAATTCCCatggcgagttctgcattatccat > 1:2138533‑M1/1‑27 (MQ=255) agaATATGGGCCGAATGAAATTCCCatggcgagttctgcattatccattg > 1:364002‑M1/1‑25 (MQ=255) gaATATGGGCCGAATGAAATTCCCatggcgagttctgcattatccattgc < 1:1245498‑M1/50‑27 (MQ=255) gaATATGGGCCGAATGAAATTCCCatggcgagttctgcattatccattg > 1:608172‑M1/1‑24 (MQ=255) aaTATGGGCCGAATGAAATTCCCatggcgagttctgcattatccattgca > 1:635354‑M1/1‑23 (MQ=255) atGGGCCGAATGAAATTCCCatggcgagttctgcattatccattgcatt > 1:304718‑M1/1‑20 (MQ=255) gCCGAATGAAATTCCCatggcgagttctgcattatccattgcatttatat < 1:1637822‑M1/50‑35 (MQ=255) gCCGAATGAAATTCCCatggcgagttctgcattatccattgcatttacat > 1:1737712‑M1/1‑16 (MQ=255) gAATGAAATTCCCatggcgagttctgcattatccattgcatttatatctt < 1:1403118‑M1/50‑38 (MQ=255) aaTGAAATTCCCatggcgagttctgcattatccattgcatttatatctt > 1:132899‑M1/1‑12 (MQ=255) tGAAATTCCCatggcgagttctgcattatccattgcatttatatcttga > 1:2147189‑M1/1‑10 (MQ=255) aaTTCCCatggcgagttctgcattatccattgcatttatatcttgaaaga < 1:1617333‑M1/50‑44 (MQ=255) aaTTCCCatggcgagttctgcattatccattgcatttatatcttgaaag > 1:428605‑M1/1‑7 (MQ=255) cccatggcgagttctgcattatccattgcatttatatcttgaaagaaa > 1:396335‑M1/1‑3 (MQ=255) cccatggcgagttctgcattatccattgcatttatatcttgaaagaaa > 1:1571919‑M1/1‑3 (MQ=255) ccatggcgagttctgcattatccattgcatttatatcttgaaagaaa > 1:2313178‑M1/1‑2 (MQ=255) | GTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAAT > NC_000913/675503‑675596 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |