Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_000913 | 1,400,314 | Δ1 bp | coding (1460/1527 nt) | abgT ← | p‑aminobenzoyl glutamate:H(+) symporter |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 1,400,314 | 0 | A | . | 100.0% | 62.5 / NA | 14 | coding (1460/1527 nt) | abgT | p‑aminobenzoyl glutamate:H(+) symporter |
Reads supporting (aligned to +/- strand): ref base A (0/0); new base . (7/7); total (7/7) |
ACCTATCGGCAGACCGACAAGATACCACGCCAGCAACATCAGCAGCCATACCACCAAAAAGATAAGTGGATAGGGCA > NC_000913/1400274‑1400350 | aCCTATCGGCAGACCGACAAGATACCACGCCAGC‑ACATC‑GCAGCCATac > 1:954867/1‑49 (MQ=38) cctATCGGCAGACCGACAAGATACCACGCCAGC‑ACATC‑GCAGCCATACt < 1:444314‑M1/48‑2 (MQ=255) tCGGCAGACCGACAAGATACCACGCCAGC‑ACATC‑GCAGCCATACtatg < 1:1959216‑M1/48‑5 (MQ=255) tCGGCAGACCGACAAGATACCACGCCAGC‑ACATC‑GCAGCCATACtat < 1:1217251‑M1/47‑4 (MQ=255) cGGCAGACCGACAAGATACCACGCCAGC‑ACATC‑GCAGCCATACtatg > 1:2177593‑M1/1‑43 (MQ=255) gCAGACCGACAAGATACCACGCCAGC‑ACATC‑GCAGCCATACtatgcaga < 1:1815041‑M1/49‑9 (MQ=255) cAGACCGACAAGATACCACGCCAGC‑ACATC‑GCAGCCATACtatgcaga > 1:1245396‑M1/1‑40 (MQ=255) cAGACCGACAAGATACCACGCCAGC‑ACATC‑GCAGCCATACtatgcaga > 1:1274776‑M1/1‑40 (MQ=255) cGACAAGATACCACGCCAGC‑ACATC‑GCAGCCATACtatgcagaaacaat < 1:1055166‑M1/49‑15 (MQ=255) cGACAAGATACCACGCCAGC‑ACATC‑GCAGCCATACtatgcagaaacaat < 1:2020749‑M1/49‑15 (MQ=255) cAAGATACCACGCCAGC‑ACATC‑GCAGCCATACtatgcagaaacaatgct < 1:1323543‑M1/49‑18 (MQ=255) aaGATACCACGCCAGC‑ACATC‑GCAGCCATACtatgcagaaacaatgctg > 1:853275‑M1/1‑31 (MQ=255) cACGCCAGC‑ACATC‑GCAGCCATACtatgcagaaacaatgctgtcgatgg > 1:1882013‑M1/1‑24 (MQ=255) aCGCCAGC‑ACATC‑GCAGCCATACtatgcagaaacaatgctgtcgatggc > 1:1708227‑M1/1‑23 (MQ=255) | ACCTATCGGCAGACCGACAAGATACCACGCCAGCAACATCAGCAGCCATACCACCAAAAAGATAAGTGGATAGGGCA > NC_000913/1400274‑1400350 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |