| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 167,484 | Δ5,964 bp | [fhuA]–fhuB | [fhuA], fhuC, fhuD, fhuB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 167484 | 173447 | 5964 | 28 [0] | [0] 28 | [fhuA]–fhuB | [fhuA],fhuC,fhuD,fhuB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 167483 | 0 (0.000) | 28 (0.920) | 21/96 | 0.2 | 100% | intergenic (+219/‑1) | mrcB/fhuA | peptidoglycan glycosyltransferase/peptidoglycan DD‑transpeptidase MrcB/ferrichrome outer membrane transporter/phage receptor |
| ? | NC_000913 | 173448 = | 0 (0.000) | intergenic (+4/+154) | fhuB/hemL | iron(III) hydroxamate ABC transporter membrane subunit/glutamate‑1‑semialdehyde aminotransferase | |||||
ATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/167437‑167483‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGA > NC_000913/173448‑173495 ATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAT < 1:278372/48‑1 TCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTC > 1:1478946/1‑49 CATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTC > 1:1656571/1‑48 ATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCA > 1:196521/1‑49 ATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCC < 1:110094/48‑1 ATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCC < 1:1998065/48‑1 CTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATA > 1:6024/1‑48 CTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATA > 1:1519965/1‑48 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAAC < 1:981887/49‑1 TTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACG > 1:197760/1‑49 TTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACG < 1:701249/49‑1 TTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACG > 1:395559/1‑49 TTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGG > 1:1345451/1‑49 GTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCT > 1:1512570/1‑49 TTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCC > 1:661138/1‑49 CACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTG > 1:1828001/1‑49 CACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTG > 1:795279/1‑49 CTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGA > 1:1963080/1‑49 CTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGA > 1:1562157/1‑49 TTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACG > 1:1755587/1‑49 GAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGC > 1:1898198/1‑49 GATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGT > 1:2117195/1‑49 ATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTT > 1:662248/1‑49 ATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTT > 1:1991481/1‑49 CCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGC > 1:1308787/1‑49 CATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGC > 1:252599/1‑48 ATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGA > 1:1348976/1‑49 ATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGA > 1:1903749/1‑49 ATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/167437‑167483‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGA > NC_000913/173448‑173495 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |