| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 675,552 | Δ7,819 bp | ybeQ–[hscC] | ybeQ, ybeR, djlB, ybeT, ybeU, djlC, [hscC] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 675552 | 683370 | 7819 | 31 [0] | [0] 31 | ybeQ–[hscC] | ybeQ,ybeR,djlB,ybeT,ybeU,djlC,[hscC] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 675551 | 0 (0.000) | 31 (1.020) | 24/96 | 0.1 | 100% | intergenic (+51/+19) | ybeL/ybeQ | DUF1451 domain‑containing protein YbeL/Sel1 repeat‑containing protein YbeQ |
| ? | NC_000913 | 683371 = | 0 (0.000) | coding (23/1671 nt) | hscC | chaperone protein HscC | |||||
TTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/675509‑675551‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAA > NC_000913/683371‑683416 TTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCG < 1:489033/49‑1 GCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTT > 1:2365348/1‑49 GCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTT < 1:863969/49‑1 GCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTT > 1:219794/1‑49 CACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTC < 1:872397/49‑1 GCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCA > 1:228698/1‑49 CAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCAT > 1:942257/1‑49 AATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATT < 1:1395835/49‑1 AGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATT < 1:1985961/49‑1 AATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTG > 1:1372654/1‑48 ATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCA > 1:1629950/1‑49 ATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCA < 1:861630/49‑1 TATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCAT < 1:365645/49‑1 TATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCAT > 1:844982/1‑49 CCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATAT < 1:339827/49‑1 CGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATC > 1:2105292/1‑49 CGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATC > 1:1141938/1‑49 AATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTT > 1:1426093/1‑49 AATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTT > 1:991317/1‑49 ATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTG < 1:1129617/49‑1 ATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTG < 1:2033081/49‑1 ATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTG < 1:1002041/49‑1 ATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTT > 1:2199666/1‑48 TGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGA < 1:1170591/49‑1 TGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTG > 1:1813494/1‑48 AAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAA < 1:1381488/49‑1 AAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAA < 1:998763/49‑1 ATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGA < 1:350869/49‑1 ATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGA < 1:1630842/49‑1 TCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAA > 1:940396/1‑48 CCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAA < 1:2085494/48‑1 TTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/675509‑675551‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAA > NC_000913/683371‑683416 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |