| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,388,889 | Δ9,734 bp | ycjG–[uspE] | ycjG, mpaA, ymjC, ymjD, ycjY, pgrR, mppA, ynaI, insH‑4, ynaJ, [uspE] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1388889 | 1398622 | 9734 | 32 [0] | [0] 33 | ycjG–[uspE] | ycjG,mpaA,ymjC,ymjD,ycjY,pgrR,mppA,ynaI,insH‑4,ynaJ,[uspE] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1388888 | 0 (0.000) | 32 (1.070) | 26/94 | 0.0 | 100% | intergenic (‑77/‑42) | tpx/ycjG | lipid hydroperoxide peroxidase/L‑Ala‑D/L‑Glu epimerase |
| ? | NC_000913 | 1398623 = | 0 (0.000) | intergenic (‑1/+151) | uspE/fnr | universal stress protein with a role cellular motility/DNA‑binding transcriptional dual regulator FNR | |||||
GTCACACCTAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1388842‑1388888‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tACAGGGTCTCCTTACAACAACTGTCAACGCAGTTTGTAATTAAAAGA > NC_000913/1398623‑1398669 GTCACACCTAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATTAC < 1:1041757/49‑1GTCACACCTAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATTA > 1:637944/1‑48 TCACACCTAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATTA > 1:102216/1‑47 ACACCTAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATTACAG < 1:1356588/48‑1 ACACCTAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATTACAG < 1:366543/48‑1 TATGCTAACTGTCAATAACACAGCAAACGCTATTACAGGGTCTCCTTA > 1:1266772/1‑48 ATGCTAACTGTCAATAACACAGCAAACGCTATTACAGGGTCTCCTTAC < 1:536693/48‑1 ATGCTAACTGTCAATAACACAGCAAACGCTATTACAGGGTCTCCTTAC < 1:1759026/48‑1 ACTGTCAATAACACAGCAAACGCTATTACAGGGTCTCCTTACAACAACT < 1:1835496/49‑1 GTCAATAACACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGT > 1:1277306/1‑48 TCAATAACACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGTC > 1:2238694/1‑48 CAATAACACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGTCAA > 1:1574920/1‑49 AATAACACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGTCAAC > 1:213870/1‑49 AATAACACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGTCAAC > 1:533851/1‑49 AATAACACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGTCAAC > 1:1584693/1‑49 AATAACACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGTCAA < 1:2076773/48‑1 TAACACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGTCAACGC < 1:894879/49‑1 TAACACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGTCAACGC < 1:818425/49‑1 ACACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGTCAACGCAG < 1:723612/49‑1 ACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGTCAACGCAGTT < 1:1621641/49‑1 ACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGTCAACGCAGTT > 1:602091/1‑49 GCAAACGCTATTACAGGGTCTCCTTACAACAACTGTCAACGCAGTTTG > 1:1635959/1‑48 CAAACGCTATTACAGGGTCTCCTTACAACAACTGTCAACGCAGTTTGT > 1:1185398/1‑48 AAACGCTATTACAGGGTCTCCTTACAACAACTGTCAACGCAGTTTGTAA > 1:1816372/1‑49 ACGCTATTACAGGGTCTCCTTACAACAACTGTCAACGCAGTTTGTAATT < 1:901782/49‑1 ACGCTATTACAGGGTCTCCTTACAACAACTGTCAACGCAGTTTGTAATT < 1:389364/49‑1 CTATTACGGGGTCTCCTTACAACAACTGTCAACGCAGTTTGTAATTAA > 1:1216739/1‑48 TATTACAGGGTCTCCTTACAACAACTGTCAACGCAGTTTGTAATTAA > 1:37473/1‑47 ATTACAGGGTCTCCTTACAACAACTGTCAACGCAGTTTGTAATTAA > 1:944913/1‑46 TTACAGGGTCTCCTTACAACAACTGTCAACGCAGTTTGTAATTAAAAGA < 1:911971/49‑1 TTACAGGGTCTCCTTACAACAACTGTCAACGCAGTTTGTAATTAAAA < 1:1498055/47‑1 TTACAGGGTCTCCTTACAACAACTGTCAACGCAGTTTGTAATTAA > 1:404494/1‑45 GTCACACCTAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1388842‑1388888‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tACAGGGTCTCCTTACAACAACTGTCAACGCAGTTTGTAATTAAAAGA > NC_000913/1398623‑1398669 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |