Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 1,400,325 Δ81,931 bp [abgT]–[azoR] 87 genes

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 1400325 1482255 81931 20 [0] [0] 19 [abgT]–[azoR] [abgT],abgB,abgA,abgR,mcaS,smrA,dgcM,zntB,fnrS,ynaL,dbpA,ttcA,intR,xisR,rcbA,ralA,ralR,recT,recE,racC,ydaE,kilR,sieB,ydaF,ydaG,racR,ydaS,ydaT,ydaU,ydaV,ydaW,rzpR,rzoR,trkG,ynaK,ydaY,ynaA,lomR,insH‑5,lomR,stfR,tfaR,pinR,ynaE,ynaM,ttcC,uspF,ompN,micC,ydbK,ydbJ,hslJ,ldhA,ydbH,ynbE,ydbL,feaR,feaB,tynA,paaZ,paaA,paaB,paaC,paaD,paaE,paaF,paaG,paaH,paaI,paaJ,paaK,paaX,paaY,ynbG,ydbA,insD‑2,insC‑2,ydbA,insI‑2,ydbA,pdxI,ydbD,ynbA,ynbB,ynbC,ynbD,[azoR]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 14003240 (0.000)19 (0.620) 15/96 0.5 100% coding (1450/1527 nt) abgT p‑aminobenzoyl glutamate:H(+) symporter
?NC_000913 1482256 = 0 (0.000)coding (605/606 nt) azoR FMN dependent NADH:quinone oxidoreductase

‑CTATCGGCAGACCGACAAGATACCACGCCAGCAACATCAGCAGCCATAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1400276‑1400324
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TATGCAGAAACAATGCTGTCGATGGCTGCTTTTGCGTCAGACTGTGC  >  NC_000913/1482256‑1482302
                                                                                                 
cCTATCGGCAGACCGACAAGATACCACGCCAGC‑ACATC‑GCAGCCATACT                                                <  1:444314/48‑1
    TCGGCAGACCGACAAGATACCACGCCAGC‑ACATC‑GCAGCCATACTATG                                             <  1:1959216/48‑1
    TCGGCAGACCGACAAGATACCACGCCAGC‑ACATC‑GCAGCCATACTAT                                              <  1:1217251/47‑1
     CGGCAGACCGACAAGATACCACGCCAGC‑ACATC‑GCAGCCATACTATG                                             >  1:2177593/1‑47
       GCAGACCGACAAGATACCACGCCAGC‑ACATC‑GCAGCCATACTATGCAGA                                         <  1:1815041/49‑1
        CAGACCGACAAGATACCACGCCAGC‑ACATC‑GCAGCCATACTATGCAGA                                         >  1:1274776/1‑48
        CAGACCGACAAGATACCACGCCAGC‑ACATC‑GCAGCCATACTATGCAGA                                         >  1:1245396/1‑48
             CGACAAGATACCACGCCAGC‑ACATC‑GCAGCCATACTATGCAGAAACAAT                                   <  1:1055166/49‑1
             CGACAAGATACCACGCCAGC‑ACATC‑GCAGCCATACTATGCAGAAACAAT                                   <  1:2020749/49‑1
                CAAGATACCACGCCAGC‑ACATC‑GCAGCCATACTATGCAGAAACAATGCT                                <  1:1323543/49‑1
                 AAGATACCACGCCAGC‑ACATC‑GCAGCCATACTATGCAGAAACAATGCTG                               >  1:853275/1‑49
                        CACGCCAGC‑ACATC‑GCAGCCATACTATGCAGAAACAATGCTGTCGATGG                        >  1:1882013/1‑49
                         ACGCCAGC‑ACATC‑GCAGCCATACTATGCAGAAACAATGCTGTCGATGGC                       >  1:1708227/1‑49
                                        GCAGCCATACTATGCAGAAACAATGCTGTCGATGGCTGCTTTTGCGTC           <  1:611642/48‑1
                                          AGCCATACTATGCAGAAACAATGCTGTCGATGGCTGCTTTTGCGTCAGA        >  1:890594/1‑49
                                            CCATACTATGCAGAAACAATGCTGTCGATGGCTGCTTTTGCGTCAGACT      <  1:1349958/49‑1
                                            CCATACTATGCAGAAACAATGCTGTCGATGGCTGCTTTTGCGTCAGACT      <  1:1744814/49‑1
                                             CATACTATGCAGAAACAATGCTGTCGATGGCTGCTTTTGCGTCAGACTG     >  1:2176798/1‑49
                                                ACTATGCAGAAACAATGCTGTCGATGGCTGCTTTTGCGTCAGACTGTGC  >  1:1323738/1‑49
                                                                                                 
‑CTATCGGCAGACCGACAAGATACCACGCCAGCAACATCAGCAGCCATAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1400276‑1400324
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TATGCAGAAACAATGCTGTCGATGGCTGCTTTTGCGTCAGACTGTGC  >  NC_000913/1482256‑1482302

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.