| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,165,151 | Δ12,060 bp | yegP–gatY | 17 genes yegP, yegQ, cyaR, ogrK, yegZ, yegR, yegS, gatR, insE‑5, insF‑5, gatR, gatD, gatC, gatB, gatA, gatZ, gatY |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2165151 | 2177210 | 12060 | 29 [0] | [0] 29 | yegP–gatY | yegP,yegQ,cyaR,ogrK,yegZ,yegR,yegS,gatR,insE‑5,insF‑5,gatR,gatD,gatC,gatB,gatA,gatZ,gatY |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2165150 | 0 (0.000) | 29 (0.950) | 24/96 | 0.1 | 100% | intergenic (+152/‑39) | baeR/yegP | DNA‑binding transcriptional activator BaeR/DUF1508 domain‑containing protein YegP |
| ? | NC_000913 | 2177211 = | 0 (0.000) | intergenic (‑7/+301) | gatY/fbaB | tagatose‑1,6‑bisphosphate aldolase 2 subunit GatY/fructose‑bisphosphate aldolase class I | |||||
GCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2165104‑2165150‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTG > NC_000913/2177211‑2177255 GCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAAT < 1:1269643/49‑1 AGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGT < 1:22402/49‑1 AGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGT > 1:2103295/1‑49 GAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTC > 1:2115057/1‑49 GCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTT > 1:2191968/1‑49 GCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTT < 1:1787433/49‑1 TCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTT > 1:2272624/1‑49 ATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTC < 1:2319804/48‑1 TACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGA < 1:510023/49‑1 TACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGA > 1:157267/1‑49 TACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGA > 1:2020615/1‑49 TTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTT > 1:986061/1‑49 TTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTT > 1:406382/1‑49 TAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTC > 1:2187955/1‑48 TAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTC > 1:952565/1‑48 TAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTT < 1:1302068/47‑1 ATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAA < 1:1477562/49‑1 TCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAA > 1:1459718/1‑49 TCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAA > 1:311423/1‑49 GGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATA > 1:2209522/1‑49 GGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATA < 1:559936/49‑1 GGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAAT < 1:375918/48‑1 CACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAAT < 1:1818283/49‑1 ACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATT < 1:464106/49‑1 CCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTA > 1:1041282/1‑49 TTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATT > 1:1706592/1‑49 TAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATT < 1:156461/47‑1 TAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATT < 1:1015776/47‑1 AGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTG < 1:1953444/48‑1 GCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2165104‑2165150‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTG > NC_000913/2177211‑2177255 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |