| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,651,293 | Δ2,422 bp | [yhiS]–yhiS | [yhiS], insH‑11, yhiS | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3651293 | 3653714 | 2422 | 30 [0] | [0] 30 | [yhiS]–yhiS | [yhiS],insH‑11,yhiS |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3651292 | 0 (0.000) | 29 (1.000) | 28/92 | 0.0 | 100% | pseudogene (2/746 nt) | yhiS | putative uncharacterized protein YhiS |
| ? | NC_000913 | 3653715 = | 0 (0.000) | intergenic (+2/‑246) | yhiS/slp | putative uncharacterized protein YhiS/starvation lipoprotein | |||||
TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3651243‑3651292‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATG > NC_000913/3653715‑3653761 TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTA > 1:1730890/1‑49 TTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGA > 1:895806/1‑49 TAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGAT > 1:1635527/1‑49 AAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGAT < 1:708126/48‑1 AACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATT < 1:998345/48‑1 AGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACT > 1:513786/1‑49 GCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTT > 1:2334208/1‑49 GCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTT < 1:2060646/49‑1 CATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTT < 1:1337043/49‑1 ATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTA < 1:1881460/49‑1 AAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATA < 1:1763356/48‑1 ACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATC < 1:1136667/49‑1 ACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAAT > 1:1628287/1‑48 CAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCA > 1:646660/1‑49 AAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCAT > 1:1048852/1‑49 AAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCAT < 1:1932148/49‑1 TGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTG > 1:199095/1‑48 ATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAA < 1:704336/48‑1 AATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAA < 1:271328/48‑1 AATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAA > 1:1683404/1‑48 AATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAA < 1:1627102/48‑1 TAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA > 1:2288657/1‑49 AGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA > 1:2048664/1‑47 GGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAG < 1:539537/49‑1 GAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA > 1:2081940/1‑45 AATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGAT < 1:489084/49‑1 TTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTT < 1:234782/49‑1 TTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTT > 1:997262/1‑49 TTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTT < 1:703352/48‑1 TATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTAT > 1:723423/1‑49 TATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATG > 1:565460/1‑48 TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3651243‑3651292‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATG > NC_000913/3653715‑3653761 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |