| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,720,634 | Δ1,442 bp | IS150‑mediated | insJ–insK | insJ, insK |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3720634 | 3722075 | 1442 | 20 [0] | [0] 20 | insJ–insK | insJ,insK |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3720633 | 0 (0.000) | 20 (0.660) | 18/96 | 0.3 | 100% | noncoding (1/1443 nt) | IS150 | repeat region |
| ? | NC_000913 | 3722076 = | 0 (0.000) | intergenic (+27/+252) | insK/glyS | IS150 conserved protein InsB/glycine‑‑tRNA ligase subunit beta | |||||
TATTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3720587‑3720633‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGG > NC_000913/3722076‑3722122 TATTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAAC > 1:61513/1‑49 cGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTT < 1:494974/48‑1 cGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTT < 1:2321634/48‑1 TTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATATCTTTGATTTATAG < 1:1474958/49‑1 TCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGT > 1:924131/1‑49 CCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGT > 1:693636/1‑48 CCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGT > 1:817828/1‑47 CAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAG > 1:2027360/1‑49 GCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGT < 1:1961168/49‑1 GCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGT > 1:2017375/1‑49 CTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGG > 1:2298857/1‑49 TGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTT < 1:1921814/49‑1 TTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTT < 1:1015474/48‑1 CCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCT > 1:1874354/1‑49 AACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGC < 1:292571/49‑1 ACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCC > 1:1244837/1‑49 GAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTT < 1:511118/49‑1 GTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTC > 1:2007443/1‑49 GTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTC < 1:1317662/49‑1 ATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGG > 1:718198/1‑49 TATTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3720587‑3720633‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGG > NC_000913/3722076‑3722122 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |