| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 4,626,183 | (GCG)3→2 | coding (272‑274/1383 nt) | radA → | DNA recombination protein |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 4626176 | 4626178 | 3 | 18 [0] | [0] 18 | radA | DNA recombination protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4626179 = | 0 (0.000) | 14 (0.540) | 13/82 | 0.5 | 100% | coding (268/1383 nt) | radA | DNA recombination protein |
| ? | NC_000913 | = 4626175 | 0 (0.000) | coding (264/1383 nt) | radA | DNA recombination protein | |||||
TCCCCGCACCAGGGTTACCGCCAATCAGAATGGCACTTCCTGGCACCACGCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4626233‑4626179‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgccTAGTACGCGGTCGAACTCTTTAAATCCGGTGGAAAAACGCGGCAGCT < NC_000913/4626175‑4626129 TCCCCGCACCAGGGTTACCGCCAATCAGAATGGCACTTCCTGGCACCAC > 1:389492/1‑49 CCCCGCACCAGGGTTACCGCCAATCAGAATGGCACTTCCTGGCACCAC < 1:1025034/48‑1 CCCCGCACCAGGGTTACCGCCAATCAGAATGGCACTTCCTGGCACCAC < 1:1457804/48‑1 CGCACCAGGGTTACCGCCAATCAGAATGGCACTTCCTGGCACCACGCCG > 1:94034/1‑49 ACCAGGGTTACCGCCAATCAGAATGGCACTTCCTGGCACCACGCCGCCT < 1:2225059/49‑1 GGGTTACCGCCAATCAGAATGGCACTTCCTGGCACCACGCCGCCTAGTA < 1:1472037/49‑1 TTACCGCCAATCAGAATGGCACTTCCTGGCACCACGCCGCCTAGTACGC > 1:1428584/1‑49 TTACCGCCAATCAGAATGGCACTTCCTGGCACCACGCCGCCTAGTACGC < 1:229863/49‑1 CGCCAATCAGAATGGCACTTCCTGGCACCACGCCGCCTAGTACGCGGTC < 1:1196461/49‑1 CGCCAATCAGAATGGCACTTCCTGGCACCACGCCGCCTAGTACGCGGTC > 1:566331/1‑49 CGCCAATCAGAATGGCACTTCCTGGCACCACGCCGCCTAGTACGCGGTC > 1:1748414/1‑49 AATCAGAATGGCACTTCCTGGCACCACGCCGCCTAGTACGCGGTCGAAC > 1:69992/1‑49 ATGGCACTTCCTGGCACCACGCCGCCTAGTACGCGGTCGAACTCTTTAA < 1:106626/49‑1 GCACTTCCTGGCACCACGCCGCCTAGTACGCGGTCGAACTCTTTAAATC < 1:2286686/49‑1 CTGGCACCACGCCGCCTAGTACGCGGTCGAACTCTTTAAATCCGGTGG < 1:398778/48‑1 GCACCACGCCGCCTAGTACGCGGTCGAACTCTTTAAATCCGGTGGAAA > 1:1385976/1‑48 ACCACGCCGCCTAGTACGCGGTCGAACTCTTTAAATCCGGTGGAAAAAC < 1:418584/49‑1 CCACGCCGCCTAGTACGCGGTCGAACTCTTTAAATCCGGTGGAAAAACG < 1:1732598/49‑1 CCGCCTAGTACGCGGTCGAACTCTTTAAATCCGGTGGAAAAACGCGG > 1:2120102/1‑47 CGCCTAGTACGCGGTCGAACTCTTTAAATCCGGTGGAAAAACGCGGCAG < 1:1340616/49‑1 CGCCTAGTACGCGGTCGAACTCTTTAAATCCGGTGGAAAAACGCGGCAG > 1:1141119/1‑49 CCTAGTACGCGGTCGAACTCTTTAAATCCGGTGGAAAAACGCGGCAGCT < 1:723358/49‑1 TCCCCGCACCAGGGTTACCGCCAATCAGAATGGCACTTCCTGGCACCACGCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4626233‑4626179‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgccTAGTACGCGGTCGAACTCTTTAAATCCGGTGGAAAAACGCGGCAGCT < NC_000913/4626175‑4626129 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |