Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	2859652	2867268	7617	8 [5]	[0] 47	[mutS]–[rpoS]	[mutS],pphB,ygbI,ygbJ,ygbK,ygbL,ygbM,ygbN,[rpoS]

TGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGACGCGCAAA  >  NC_000913/2867221‑2867317                                                 |                                                 ggcgtaatgaccattcagtttgcgttcgtcgttaccaaacagcaccgat                                                  >  1:892101‑M2/49‑49 (MQ=255)  gcgtaatgaccattcagtttgcgttcgtcgttaccaaacagcaccgatc                                                 <  1:1756010‑M2/2‑1 (MQ=255)    gtaatgaccattcagtttgcgttcgtcgttaccaaacagcaccgatcat                                               <  1:1987652‑M2/4‑1 (MQ=255)       atgaccattcagtttgcgttcgtcgttaccaaacagcaccgaTCATcc                                             <  1:637730‑M2/6‑1 (MQ=255)       atgaccattcagtttgcgttcgtcgttaccaaacagcaccgaTCATCcg                                            <  1:582321‑M2/7‑1 (MQ=255)       atgaccattcagtttgcgttcgtcgttaccaaacagcaccgaTCATCcg                                            >  1:1876768‑M2/43‑49 (MQ=255)        tgaccattcagtttgcgttcgtcgttaccaaacagcaccgaTCATCcgg                                           <  1:78506‑M2/8‑1 (MQ=255)        tgaccattcagtttgcgttcgtcgttaccaaacagcaccgaTCATCcgg                                           >  1:1487995‑M2/42‑49 (MQ=255)          accattcagtttgcgttcgtcgttaccaaacagcaccgaTCATCcggcg                                         <  1:437644‑M2/10‑1 (MQ=255)            cattcagtttgcgttcgtcgttaccaaacagcaccgaTCATCCggcggc                                       >  1:926434‑M2/38‑49 (MQ=255)            cattcagtttgcgttcgtcgttaccaaacagcaccgaTCATCCggcggc                                       >  1:33545‑M2/38‑49 (MQ=255)             attcagtttgcgttcgtcgttaccaaacagcaccgaTCATCCggcggc                                       >  1:638410‑M2/37‑48 (MQ=255)              ttcagtttgcgttcgtcgttaccaaacagcaccgaTCATCCggcggc                                       >  1:1079983‑M2/36‑47 (MQ=255)                cagtttgcgttcgtcgttaccaaacagcaccgaTCATCCGGCGGCgag                                    <  1:107648‑M2/15‑1 (MQ=255)                 agtttgcgttcgtcgttaccaaacagcaccgaTCATCCGGCGGCGagag                                  <  1:702514‑M2/17‑1 (MQ=255)                  gtttgcgttcgtcgttaccaaacagcaccgaTCATCCGGCGGCGAGAgg                                 >  1:1019927‑M2/32‑49 (MQ=255)                     tgcgttcgtcgttaccaaacagcaccgaTCATCCGGCGGCGAGAGGCGa                              >  1:737310‑M2/29‑49 (MQ=255)                      gcgttcgtcgttaccaaacagcaccgaTCATCCGGCGGCGAGAGGCGa                              >  1:1360513‑M2/28‑48 (MQ=255)                          tcgtcgttaccaaacagcaccgaTCATCCGGCGGCGAGAGGCGACAtct                         >  1:1123549‑M2/24‑49 (MQ=255)                            gtcgttaccaaacagcaccgaTCATCCGGCGGCGAGAGGCGACAtctc                        >  1:160599‑M2/22‑48 (MQ=255)                            gtcgttaccaaacagcaccgaTCATCCGGCGGCGAGAGGCGACAtctc                        <  1:1604836‑M2/27‑1 (MQ=255)                            gtcgttaccaaacagcaccgaTCATCCGGCGGCGAGAGGCGACAtctc                        >  1:1100084‑M2/22‑48 (MQ=255)                             tcgttaccaaacagcaccgaTCATCCGGCGGCGAGAGGCGACATCTCCa                      <  1:458479‑M2/29‑1 (MQ=255)                             tcgttaccaaacagcaccgaTCATCCGGCGGCGAGAGGCGACATCTCCa                      >  1:1987542‑M2/21‑49 (MQ=255)                             tcgttaccaaacagcaccgaTCATCCGGCGGCGAGAGGCGACATCTCCa                      >  1:768658‑M2/21‑49 (MQ=255)                             tcgttaccaaacagcaccgaTCATCCGGCGGCGAGAGGCGACATCTCCa                      >  1:2255263‑M2/21‑49 (MQ=255)                              cgttaccaaacagcaccgaTCATCCGGCGGCGAGAGGCGACATCTCCAc                     >  1:1865555‑M2/20‑49 (MQ=255)                               gttaccaaacagcaccgaTCATCCGGCGGCGAGAGGCGACATCTCCAc                     <  1:1765038‑M2/30‑1 (MQ=255)                               gttaccaaacagcaccgaTCATCCGGCGGCGAGAGGCGACATCTCCACg                    >  1:2292293‑M2/19‑49 (MQ=255)                               gttaccaaacagcaccgaTCATCCGGCGGCGAGAGGCGACATCTCCACg                    <  1:465950‑M2/31‑1 (MQ=255)                               gttaccaaacagcaccgaTCATCCGGCGGCGAGAGGCGACATCTCCACg                    >  1:115460‑M2/19‑49 (MQ=255)                                ttaccaaacagcaccgaTCATCCGGCGGCGAGAGGCGACATCTCCACg                    >  1:113262‑M2/18‑48 (MQ=255)                                  accaaacagcaccgaTCATCCGGCGGCGAGAGGCGACATCTCCACGCAg                 >  1:273301‑M2/16‑49 (MQ=255)                                  accaaacagcaccgaTCATCCGGCGGCGAGAGGCGACATCTCCACGCAg                 >  1:1767355‑M2/16‑49 (MQ=255)                                    caaacagcaccgaTCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTg               <  1:1779653‑M2/36‑1 (MQ=255)                                      aacagcaccgaTCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTgcg             >  1:884182‑M2/12‑49 (MQ=255)                                        cagcaccgaTCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGcgcg           <  1:1697536‑M2/40‑1 (MQ=255)                                        cagcaccgaTCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGcgcg           <  1:1651630‑M2/40‑1 (MQ=255)                                         agcaccgaTCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGa          <  1:1706165‑M2/41‑1 (MQ=255)                                         agcaccgaTCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGa          <  1:964599‑M2/41‑1 (MQ=255)                                         agcaccgaTCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGa          >  1:2210563‑M2/9‑49 (MQ=255)                                          gcaccgaTCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGAc         >  1:753062‑M2/8‑49 (MQ=255)                                            accgaTCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGAcgc       >  1:1302019‑M2/6‑49 (MQ=255)                                            accgaTCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGAcgc       >  1:1107702‑M2/6‑49 (MQ=255)                                               gaTCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGACgcgc     >  1:229022‑M2/3‑48 (MQ=255)                                               gaTCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGACgcgc     >  1:2097819‑M2/3‑48 (MQ=255)                                                 tcatcCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGACGCGCaaa  <  1:1343741/49‑1 (MQ=255)                                                 |                                                 TGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGACGCGCAAA  >  NC_000913/2867221‑2867317

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑