| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,485,906 | C→A | A16S (GCC→TCC) | pepA ← | aminopeptidase A/I |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,485,906 | 0 | C | A | 100.0% | 68.4 / NA | 18 | A16S (GCC→TCC) | pepA | aminopeptidase A/I |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (6/12); total (6/12) | |||||||||||
ATCGGAGAAAGGCGACGTGGTTCGAAGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCAT > NC_000913/4485860‑4485951 | aTCGGAGAAAGGCGACGTGGTTCGAAGACGCCCACGACGATGCAGGAAc < 1:618603/49‑1 (MQ=255) gaAAGGCGACGTGGTTCGAAGACGCCCACGACGATGCAGGAACTCCGCt > 1:129372/1‑49 (MQ=255) gaAAGGCGACGTGGTTCGAAGACGCCCACGACGATGCAGGAACTCCGCt < 1:2280960/49‑1 (MQ=255) aaGGCGACGTGGTTCGAAGACGCCCACGACGATGCAGGAACTCCGCTGt < 1:2072663/49‑1 (MQ=255) aGGCGACGTGGTTCGAAGACGCCCACGACGATGCAGGAACTCCGCTGtt > 1:1271986/1‑49 (MQ=255) aGGCGACGTGGTTCGAAGACGCCCACGACGATGCAGGAACTCCGCTGtt > 1:1362547/1‑49 (MQ=255) aCGTGGTTCGAAGACGCCCACGACGATGCAGGAACTCCGCTGTTTCTcc > 1:920832/1‑49 (MQ=255) aCGTGGTTCGAAGACGCCCACGACGATGCAGGAACTCCGCTGTTTCTcc < 1:2047456/49‑1 (MQ=255) cGTGGTTCGAAGACGCCCACGACGATGCAGGAACTCCGCTGTTTCTCCg < 1:621092/49‑1 (MQ=255) gAAGACGCCCACGACGATGCAGGAACTCCGCTGTTTCTCCGGGCTAcc < 1:698616/48‑1 (MQ=255) gAAGACGCCCACGACGATGCAGGAACTCCGCTGTTTCTCCGGGCTACCg > 1:759301/1‑49 (MQ=255) aaGACGCCCACGACGATGCAGGAACTCCGCTGTTTCTCCGGGCTACCGc < 1:1253038/49‑1 (MQ=255) aaGACGCCCACGACGATGCAGGAACTCCGCTGTTTCTCCGGGCTACCGc < 1:1037012/49‑1 (MQ=255) cGCCCACGACGATGCAGGAACTCCGCTGTTTCTCCGGGCTACCGCtttt < 1:1679698/49‑1 (MQ=255) gCCCACGACGATGCAGGAACTCCGCTGTTTCTCCGGGCTACCGCttttt < 1:1443414/49‑1 (MQ=255) acgacgATGCAGGAACTCCGCTGTTTCTCCGGGCTACCGCTTTTTacac > 1:1931762/1‑49 (MQ=255) cgacgaTGCAGGAACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACt < 1:1404177/49‑1 (MQ=255) aGGAACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCAt < 1:1146266/49‑1 (MQ=255) | ATCGGAGAAAGGCGACGTGGTTCGAAGACGCCCACGACGATGCAGGCACTCCGCTGTTTCTCCGGGCTACCGCTTTTTACACTAAACTCCAT > NC_000913/4485860‑4485951 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |