Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_000913 | 1,741,062 | T→C | C384C (TGT→TGC) | ydhC → | putative transporter YdhC |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 1,741,062 | 0 | T | C | 100.0% | 50.2 / NA | 14 | C384C (TGT→TGC) | ydhC | putative transporter YdhC |
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (6/8); total (6/8) |
GTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATGGCAATGCCGAAGTC > NC_000913/1741024‑1741101 | gtagtGCTGGTCGCGCTGGGTTACATGATGCAACGTTGCGAAGAAGTTg < 1:201212/49‑1 (MQ=255) tGCTGGTCGCGCTGGGTTACATGATGCAACGTTGCGAAGAAGTTGGCTg < 1:1376100/49‑1 (MQ=255) tGGTCGCGCTGGGTTACATGATGCAACGTTGCGAAGAAGTTGGCTGc > 1:735522/1‑47 (MQ=255) ggTCGCGCTGGGTTACATGATGCAACGTTGCGAAGAAGTTGGCTGc > 1:1858398/1‑46 (MQ=255) gTCGCGCTGGGTTACATGATGCAACGTTGCGAAGAAGTTGGCTGCCa < 1:1604068/47‑1 (MQ=255) gcgcTGGGTTACATGATGCAACGTTGCGAAGAAGTTGGCTGCCAGAATc < 1:425645/49‑1 (MQ=255) cgcTGGGTTACATGATGCAACGTTGCGAAGAAGTTGGCTGCCAGAATCa > 1:1637828/1‑49 (MQ=255) aCATGATGCAACGTTGCGAAGAAGTTGGCTGCCAGAATCATGGCAATGc > 1:1933252/1‑49 (MQ=255) atgatgCAACGTTGCGAAGAAGTTGGCTGCCAGAATCATGGCAATTCCg < 1:128338/49‑1 (MQ=255) atgCAACGTTGCGAAGAAGTTGGCTGCCAGAATCATGGCAATGCCGaa < 1:1106450/48‑1 (MQ=255) atgCAACGTTGCGAAGAAGTTGGCTGCCAGAATCATGGCAATGCCGAAg < 1:1675258/49‑1 (MQ=255) gCAACGTTGCGAAGAAGTTGGCTGCCAGAATCATGGCAATGCCGAAGTc > 1:1014842/1‑49 (MQ=255) gCAACGTTGCGAAGAAGTTGGCTGCCAGAATCATGGCAATGCCGAAGTc > 1:678681/1‑49 (MQ=255) cAACGTTGCGAAGAAGTTGGCTGCCAGAATCATGGCAATGCCGAAGTc < 1:2279129/48‑1 (MQ=255) | GTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATGGCAATGCCGAAGTC > NC_000913/1741024‑1741101 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |