Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,829,233	C→A	L97M (CTG→ATG)	xanP →	xanthine:H(+) symporter XanP

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,829,233	0	C	A	100.0%	113.9 / NA	29	L97M (CTG→ATG)	xanP	xanthine:H(+) symporter XanP
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base A (17/12);  total (17/12)

GCATCGATTATTCAAATTAAGGCCTGGGGTCCGGTTGGCTCCGGGCTGTTGTCTATTCAGGGCACCAGCTTCAACTTTGTTGCCCCGCT  >  NC_000913/3829188‑3829276                                              |                                            gCATCGATTATTCAAATTAAGGCCTGGGGTCCGGTTGGCTCCGGGAtgg                                          <  1:54665/49‑2 (MQ=255)  cATCGATTATTCAAATTAAGGCCTGGGGTCCGGTTGGCTCCGGGAtgtt                                         >  1:1327635/1‑49 (MQ=255)  cATCGATTATTCAAATTAAGGCCTGGGGTCCGGTTGGCTCCGGGAtgtt                                         >  1:380382/1‑49 (MQ=255)   aTCGATTATTCAAATTAAGGCCTGGGGTCCGGTTGGCTCCGGGAtgttg                                        <  1:365968/49‑1 (MQ=255)    tCGATTATTCAAATTAAGGCCTGGGGTCCGGTTGGCTCCGGGAtgttgt                                       <  1:923541/49‑1 (MQ=255)    tCGATTATTCAAATTAAGGCCTGGGGTCCGGTTGGCTCCGGGAtgttgt                                       <  1:1892697/49‑1 (MQ=255)     cGATTATTCAAATTAAGGCCTGGGGTCCGGTTGGCTCCGGGATGTTGTc                                      >  1:1721774/1‑49 (MQ=255)      gATTATTCAAATTAAGGCCTGGGGTCCGGTTGGCTCCGGGATGTTGTc                                      >  1:1441211/1‑48 (MQ=255)      gATTATTCAAATTAAGGCCTGGGGTCCGGTTGGCTCCGGGATGTTGTCt                                     <  1:772573/49‑1 (MQ=255)        ttattCAAATTAAGGCCTGGGGTCCGGTTGGCTCCGGGATGTTGTCTAt                                   >  1:1796463/1‑49 (MQ=255)        ttattCAAATTAAGGCCTGGGGTCCGGTTGGCTCCGGGATGTTGTCTAt                                   >  1:2222826/1‑49 (MQ=255)         tattCAAATTAAGGCCTGGGGTCCGGTTGGCTCCGGGATGTTGTCTAtt                                  >  1:2013193/1‑49 (MQ=255)           ttCAAATTAAGGCCTGGGGTCCGGTTGGCTCCGGGATGTTGTCTATTc                                 <  1:676367/48‑1 (MQ=255)            tCAAATTAAGGCCTGGGGTCCGGTTGGCTCCGGGATGTTGTCTATTCAg                               >  1:536079/1‑49 (MQ=255)              aaaTTAAGGCCTGGGGTCCGGTTGGCTCCGGGATGTTGTCTATTCAggg                             >  1:2314790/1‑49 (MQ=255)                   aaGGCCTGGGGTCCGGTTGGCTCCGGGATGTTGTCTATTCAGGGCAc                          >  1:2288666/1‑47 (MQ=255)                    aGGCCTGGGGTCCGGTTGGCTCCGGGATGTTGTCTATTCAGGGCACCAg                       <  1:982544/49‑1 (MQ=255)                        cTGGGGTCCGGTTGGCTCCGGGATGTTGTCTATTCAGGGCACCAGCTTc                   <  1:1486399/49‑1 (MQ=255)                         tGGGGTCCGGTTGGCTCCGGGATGTTGTCTATTCAGGGCACCAGCTTc                   >  1:513376/1‑48 (MQ=255)                            ggTCCGGTTGGCTCCGGGATGTTGTCTATTCAGGGCACCAGCTTCAACt               >  1:1224170/1‑49 (MQ=255)                               ccGGTTGGCTCCGGGATGTTGTCTATTCAGGGCACCAGCTTCAACTttg            >  1:890142/1‑49 (MQ=255)                                cGGTTGGCTCCGGGATGTTGTCTATTCAGGGCACCAGCTTCAACTttgt           >  1:2086506/1‑49 (MQ=255)                                cGGTTGGCTCCGGGATGTTGTCTATTCAGGGCACCAGCTTCAACTttgt           >  1:55273/1‑49 (MQ=255)                                   ttGGCTCCGGGATGTTGTCTATTCAGGGCACCAGCTTCAACTTTGTTGc        <  1:1678558/49‑1 (MQ=255)                                     ggCTCCGGGATGTTGTCTATTCAGGGCACCAGCTTCAACTTTGTTGccc      >  1:1819454/1‑49 (MQ=255)                                      gCTCCGGGATGTTGTCTATTCAGGGCACCAGCTTCAACTTTGTTGcccc     <  1:1579312/49‑1 (MQ=255)                                      gCTCCGGGATGTTGTCTATTCAGGGCACCAGCTTCAACTTTGTTGccc      <  1:1762/48‑1 (MQ=255)                                       cTCCGGGATGTTGTCTATTCAGGGCACCAGCTTCAACTTTGTTGCCCCg    <  1:881961/49‑1 (MQ=255)                                          cGGGATGTTGTCTATTCAGGGCACCAGCTTCAACTTTGTTGCCCCGCt  >  1:72810/1‑48 (MQ=255)                                              |                                            GCATCGATTATTCAAATTAAGGCCTGGGGTCCGGTTGGCTCCGGGCTGTTGTCTATTCAGGGCACCAGCTTCAACTTTGTTGCCCCGCT  >  NC_000913/3829188‑3829276

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑