| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 167,484 | Δ5,964 bp | [fhuA]–fhuB | [fhuA], fhuC, fhuD, fhuB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 167484 | 173447 | 5964 | 47 [0] | [0] 46 | [fhuA]–fhuB | [fhuA],fhuC,fhuD,fhuB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 167483 | 0 (0.000) | 45 (1.220) | 39/96 | 0.0 | 100% | intergenic (+219/‑1) | mrcB/fhuA | peptidoglycan glycosyltransferase/peptidoglycan DD‑transpeptidase MrcB/ferrichrome outer membrane transporter/phage receptor |
| ? | NC_000913 | 173448 = | 0 (0.000) | intergenic (+4/+154) | fhuB/hemL | iron(III) hydroxamate ABC transporter membrane subunit/glutamate‑1‑semialdehyde aminotransferase | |||||
ATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/167437‑167483‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGC > NC_000913/173448‑173493 ATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATT < 1:2020154/49‑1ATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAT < 1:1608969/48‑1 TCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATA > 1:2714460/1‑49 CTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATA < 1:953985/48‑1 CTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATA < 1:1779254/48‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATGCCATTCCATATAAC < 1:354018/49‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATAT < 1:1097048/46‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATAT < 1:737810/46‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCAATATA < 1:1490156/47‑1 TTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACG < 1:2160533/49‑1 TTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGG > 1:1739427/1‑49 TACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGC > 1:343336/1‑49 CGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCC > 1:2034912/1‑49 CGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCC < 1:739358/48‑1 TATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTG > 1:2795081/1‑48 ATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTA > 1:86831/1‑49 ATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGT < 1:1055157/48‑1 ATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGT < 1:2739014/48‑1 ATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGC > 1:1429141/1‑49 ATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACG < 1:1163978/48‑1 ATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACG < 1:274433/48‑1 TTCACTTTACATCAGAGATATACCATTCCATATGACGGCCCTGTACGCC < 1:2391482/49‑1 CACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTG > 1:2767075/1‑49 ACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGG < 1:414630/49‑1 ACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTG < 1:249919/48‑1 TTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGAC > 1:1888372/1‑49 TTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGAC > 1:1303348/1‑49 TACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACG < 1:2219104/48‑1 ACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGG < 1:886308/48‑1 CATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGAT < 1:532537/49‑1 CATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGA > 1:2460784/1‑48 CATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGA < 1:2473018/48‑1 ATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGAT > 1:2586988/1‑48 TCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAA < 1:1672224/49‑1 TCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATA > 1:382251/1‑48 CAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATA > 1:802098/1‑47 AGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAA < 1:645656/48‑1 AGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCG < 1:417258/49‑1 ATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTT < 1:1777780/49‑1 TATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTT < 1:1913603/49‑1 ATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTA > 1:2354429/1‑49 TACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTAC < 1:944848/49‑1 ACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACG > 1:2496482/1‑49 CATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGC > 1:162766/1‑48 CATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGC > 1:2317496/1‑48 ATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/167437‑167483‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGC > NC_000913/173448‑173493 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |