| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 389,898 | Δ9,908 bp | yaiT–[yaiZ] | yaiT, insF‑2, insE‑2, yaiT, iprA, ampH, sbmA, yaiW, yaiY, [yaiZ] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 389898 | 399805 | 9908 | 52 [0] | [0] 52 | yaiT–[yaiZ] | yaiT,insF‑2,insE‑2,yaiT,iprA,ampH,sbmA,yaiW,yaiY,[yaiZ] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 389897 | 0 (0.000) | 50 (1.350) | 37/96 | 0.0 | 100% | intergenic (‑170/‑354) | hemB/yaiT | porphobilinogen synthase/putative autotransporter YaiT |
| ? | NC_000913 | 399806 = | 0 (0.000) | intergenic (+1/+23) | yaiZ/ddlA | DUF2754 domain‑containing protein YaiZ/D‑alanine‑‑D‑alanine ligase A | |||||
ATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/389851‑389897‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGTTA > NC_000913/399806‑399853 ATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTG > 1:565322/1‑48ATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTG > 1:850208/1‑48 GAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATA > 1:2057517/1‑49 GAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAAT < 1:649237/48‑1 CAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTAT < 1:2624234/49‑1 CAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTAT > 1:739886/1‑49 GCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCG > 1:2391946/1‑49 CAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGG < 1:1652433/49‑1 CAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGG < 1:837688/49‑1 AATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGG > 1:2117291/1‑49 AATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGG > 1:644026/1‑49 ATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGC > 1:716494/1‑49 ATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGC > 1:1051443/1‑49 ATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGC < 1:333908/49‑1 ATAATTTTATATTCACTGAAAATAATTTTAATCTTGAATATTATCGGGC < 1:206337/49‑1 AATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGT > 1:1920378/1‑49 TTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTA < 1:636651/49‑1 TTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAA > 1:2592956/1‑48 TTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAA < 1:1951630/48‑1 TTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAA < 1:1195383/48‑1 ATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAA > 1:938811/1‑48 TATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAGATA < 1:1287898/49‑1 TATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAAT < 1:1325549/48‑1 TTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATT < 1:765134/49‑1 TTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATAT < 1:1906161/48‑1 TTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATAT < 1:1305799/48‑1 TCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTA > 1:1157581/1‑49 ACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACA > 1:1545890/1‑49 ACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACA > 1:2865874/1‑49 ACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTAC < 1:1974425/48‑1 CTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACAT > 1:1994923/1‑49 AAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGT < 1:1272997/49‑1 AAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTG < 1:2103733/48‑1 AAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTG < 1:1939942/49‑1 AATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGG > 1:990383/1‑49 AATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGG < 1:1524970/49‑1 AATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGG > 1:1827870/1‑49 ATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGT < 1:1985281/49‑1 ATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGT < 1:1847089/49‑1 ATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGT < 1:2526467/49‑1 ATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTT > 1:2630999/1‑49 TTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTT < 1:1238221/48‑1 TTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTT > 1:1718719/1‑48 TTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAA > 1:2065204/1‑49 TTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAA > 1:2059261/1‑49 TTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCA < 1:2820940/48‑1 AATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAAT < 1:685399/48‑1 ATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATG < 1:2269097/48‑1 ATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATG < 1:541013/48‑1 TGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGTTA > 1:2644181/1‑49 ATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/389851‑389897‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGTTA > NC_000913/399806‑399853 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |