Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	675,552	Δ7,819 bp		ybeQ–[hscC]	ybeQ, ybeR, djlB, ybeT, ybeU, djlC, [hscC]

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	675552	683370	7819	38 [0]	[0] 39	ybeQ–[hscC]	ybeQ,ybeR,djlB,ybeT,ybeU,djlC,[hscC]

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 675551	0 (0.000)	38 (1.030)	30/96	0.1	100%	intergenic (+51/+19)	ybeL/ybeQ	DUF1451 domain‑containing protein YbeL/Sel1 repeat‑containing protein YbeQ
	?	NC_000913	683371 =	0 (0.000)					coding (23/1671 nt)	hscC	chaperone protein HscC

GATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/675507‑675551 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAA  >  NC_000913/683371‑683417                                                                                              GATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGG                                             >  1:2640180/1‑49  ATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGG                                             <  1:359692/48‑1  ATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATG                                              <  1:964862/47‑1  ATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATG                                              <  1:1855264/47‑1  ATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCAT                                               <  1:2614289/46‑1   TTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGC                                            >  1:804756/1‑48       GCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGT                                        <  1:2796689/48‑1         ACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCT                                     >  1:1500868/1‑49          CAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTG                                    <  1:2787409/49‑1              AATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATT                                <  1:2255744/49‑1                TAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTAT                              <  1:2800800/49‑1                     AGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATT                         >  1:807054/1‑49                     AGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATT                         >  1:1338479/1‑49                     AGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATT                         <  1:350269/49‑1                      GAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTG                        <  1:1276625/49‑1                      GAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTG                        <  1:1984602/49‑1                        ATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCA                      >  1:1948158/1‑49                        ATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCA                      >  1:1878519/1‑49                           TGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATT                    >  1:2443201/1‑48                              GCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATA                <  1:2185846/49‑1                                CGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATC              >  1:1438098/1‑49                                 GAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCT             <  1:1295327/49‑1                                 GAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCT             <  1:61235/49‑1                                 GAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCT             >  1:2619780/1‑49                                 GAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCT             <  1:1403984/49‑1                                   ATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTG           <  1:589826/49‑1                                   ATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTT            >  1:1135884/1‑48                                    TGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTG           >  1:1600670/1‑48                                      AAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAA        <  1:2276630/49‑1                                      AAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGA          >  1:2276381/1‑47                                       AATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAG       <  1:1311290/49‑1                                       AATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAG       <  1:933989/49‑1                                       AATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGA          >  1:1680976/1‑46                                           CCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAA    <  1:1389035/48‑1                                            CCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAA  <  1:1959230/49‑1                                            CCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAA   <  1:2615846/48‑1                                            CCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAA   <  1:648451/48‑1                                            CCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAA    >  1:306577/1‑47                                                                                              GATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/675507‑675551 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAA  >  NC_000913/683371‑683417

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.