| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,601,201 | Δ13,595 bp | [hyfA]–focB | [hyfA], hyfB, hyfC, hyfD, hyfE, hyfF, hyfG, hyfH, hyfI, hyfJ, hyfR, focB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2601201 | 2614795 | 13595 | 48 [0] | [0] 47 | [hyfA]–focB | [hyfA],hyfB,hyfC,hyfD,hyfE,hyfF,hyfG,hyfH,hyfI,hyfJ,hyfR,focB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2601200 | 0 (0.000) | 47 (1.270) | 38/96 | 0.0 | 100% | intergenic (+252/‑1) | bcp/hyfA | thiol peroxidase/hydrogenase 4 component A |
| ? | NC_000913 | 2614796 = | 0 (0.000) | intergenic (+14/+24) | focB/yfgO | putative formate transporter/putative transporter YfgO | |||||
TTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2601153‑2601200‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATC > NC_000913/2614796‑2614843 TTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACC > 1:935409/1‑49 TATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACC < 1:207602/48‑1 TATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACC < 1:2119648/48‑1 CAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAA > 1:69997/1‑48 CAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAA < 1:1847366/48‑1 AATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAA > 1:198262/1‑47 ATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACTGAAACAG > 1:18532/1‑49 ATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAG < 1:683097/49‑1 TGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTC < 1:483300/49‑1 TGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTC < 1:461697/49‑1 TGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTC > 1:1988716/1‑49 TGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTC < 1:1985113/49‑1 TGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTT < 1:653484/48‑1 AAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGT > 1:1152276/1‑49 AATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTC < 1:2225509/49‑1 AATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTC < 1:2055523/49‑1 AATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTC > 1:1033350/1‑49 AATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTC < 1:1009832/49‑1 TGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGG > 1:1113882/1‑49 TGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGG < 1:2258745/49‑1 CAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGC < 1:739970/49‑1 CAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGC > 1:2699963/1‑49 AATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCT < 1:1222654/49‑1 GTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTG > 1:1524385/1‑47 GTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTG > 1:2748032/1‑47 TTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAG < 1:1393777/49‑1 TTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTG > 1:1883714/1‑45 TTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTG > 1:1126831/1‑45 TCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGAT > 1:2589535/1‑49 CATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGAT < 1:1510651/48‑1 ATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTA > 1:1258412/1‑49 ATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTA > 1:332076/1‑49 ATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATT < 1:172346/48‑1 TATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTAT < 1:1413876/49‑1 TCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTC > 1:2196221/1‑49 TCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATT < 1:2744668/48‑1 ATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTT < 1:1183206/49‑1 TTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTG < 1:844151/49‑1 CAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGC > 1:90180/1‑48 AAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGA > 1:567789/1‑49 AAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCG < 1:2513692/48‑1 GAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTT < 1:791695/49‑1 CGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCC > 1:677800/1‑48 GACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCA > 1:298275/1‑49 GACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCA > 1:427176/1‑49 CCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATC > 1:2663290/1‑49 CCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATC < 1:1320581/49‑1 TTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2601153‑2601200‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATC > NC_000913/2614796‑2614843 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |