| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,994,992 | Δ3,877 bp | [ygeL]–ygeQ | [ygeL], ygeN, ygeO, insD‑4, insC‑4, ygeP, ygeQ | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2994992 | 2998868 | 3877 | 81 [0] | [0] 83 | [ygeL]–ygeQ | [ygeL],ygeN,ygeO,insD‑4,insC‑4,ygeP,ygeQ |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2994991 | 0 (0.000) | 78 (2.200) | 56/92 | 0.0 | 100% | pseudogene (102/156 nt) | ygeL | protein YgeL |
| ? | NC_000913 | 2998869 = | 0 (0.000) | intergenic (‑41/+115) | ygeQ/glyU | protein YgeQ/tRNA‑Gly | |||||
CTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2994942‑2994991‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGTTACA > NC_000913/2998869‑2998915 CTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCC > 1:1986180/1‑49 TGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCC > 1:911373/1‑48 TGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCC > 1:2678374/1‑48 TGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCC > 1:683346/1‑48 TAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCA < 1:789090/48‑1 TAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCC < 1:2842841/47‑1 GATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTT < 1:645260/49‑1 GATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACT < 1:2564019/48‑1 ATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTA < 1:1933770/49‑1 TTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTAT < 1:1464896/49‑1 TGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATT > 1:1388805/1‑48 GTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTT < 1:208078/48‑1 TTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAA > 1:477999/1‑49 TTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAA < 1:2809162/49‑1 TTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAA < 1:212746/49‑1 TTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTA < 1:791115/48‑1 TTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTA < 1:1818072/48‑1 TTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTA < 1:2048166/48‑1 TTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTA < 1:2636513/48‑1 ACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAAC < 1:644038/48‑1 ACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAAC > 1:1540901/1‑48 CACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAA < 1:789307/49‑1 CACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACA < 1:752747/48‑1 ACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAAC < 1:2807282/49‑1 ACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAAC > 1:1446299/1‑49 CTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACT < 1:2497964/49‑1 CTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACT < 1:2445830/49‑1 CTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACT > 1:351820/1‑49 CGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTG > 1:2036456/1‑48 CGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTG < 1:2003892/48‑1 CGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTT < 1:789371/47‑1 CGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTT < 1:2011338/47‑1 CGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTT < 1:715302/47‑1 GCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAA < 1:1903869/49‑1 GCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGA > 1:2030059/1‑48 GCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGA > 1:2487883/1‑48 TAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATA < 1:519760/49‑1 TAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATA < 1:274595/49‑1 TAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAA < 1:1524736/47‑1 AGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAAT > 1:220182/1‑47 AGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAAT > 1:160890/1‑47 AGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAAT > 1:2318222/1‑47 GCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAG < 1:2650331/49‑1 GCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAA < 1:1325124/48‑1 GCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAA < 1:872780/48‑1 TTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGT > 1:392840/1‑49 TCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGT > 1:926321/1‑49 TCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTG < 1:1395886/48‑1 TCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGT < 1:2472271/47‑1 CTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGT < 1:2527118/48‑1 CTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGT < 1:126491/48‑1 CTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGT < 1:1107192/48‑1 CAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTT < 1:2643046/48‑1 CAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTT < 1:1043192/48‑1 AGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTAC < 1:2826041/49‑1 AGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTAC > 1:1933053/1‑49 AGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTAC < 1:330959/49‑1 AGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTA < 1:2753812/48‑1 GATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACC < 1:1065984/49‑1 ATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCT > 1:2768610/1‑49 TCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTG > 1:1438903/1‑49 TCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTG > 1:570681/1‑49 TTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGT > 1:847603/1‑49 TATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTT > 1:1061994/1‑49 TATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGT < 1:2182198/48‑1 TATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGG < 1:276833/46‑1 TATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGG < 1:1441246/46‑1 TATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCT < 1:1589552/44‑1 TATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTT < 1:1404585/39‑1 TATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTT < 1:1516910/39‑1 TATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTT < 1:925553/38‑1 TATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTT < 1:703964/38‑1 ATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTT < 1:1052031/48‑1 TAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGT > 1:2382600/1‑49 TAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTG < 1:1232999/48‑1 AGCCCACTTATTTAACAACTTGAAAATAAGGGGTTTTACCTGGGTTGT > 1:2739792/1‑48 GCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGTTA < 1:228221/49‑1 GCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGTTA > 1:2537043/1‑49 GCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGTT < 1:2687392/48‑1 CCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGTTAC < 1:1478330/49‑1 CCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGTTAC < 1:1843954/49‑1 CCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGTTA > 1:470376/1‑48 CCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGTTA > 1:1865730/1‑48 CCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGTTACA < 1:2492216/49‑1 CACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGTTACA > 1:1418479/1‑48 CTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2994942‑2994991‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGTTACA > NC_000913/2998869‑2998915 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |