| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,651,293 | Δ2,422 bp | [yhiS]–yhiS | [yhiS], insH‑11, yhiS | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3651293 | 3653714 | 2422 | 52 [0] | [0] 53 | [yhiS]–yhiS | [yhiS],insH‑11,yhiS |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3651292 | 0 (0.000) | 48 (1.350) | 43/92 | 0.0 | 100% | pseudogene (2/746 nt) | yhiS | putative uncharacterized protein YhiS |
| ? | NC_000913 | 3653715 = | 0 (0.000) | intergenic (+2/‑246) | yhiS/slp | putative uncharacterized protein YhiS/starvation lipoprotein | |||||
TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3651243‑3651292‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGT > NC_000913/3653715‑3653762 TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTA < 1:2598481/49‑1 CAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATA < 1:2451671/49‑1 AAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGAT < 1:2791990/48‑1 AAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGAT < 1:785533/48‑1 AAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGAT < 1:1936472/48‑1 AACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTA > 1:1412170/1‑49 ACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTAT > 1:2454458/1‑49 ACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTAT < 1:1745385/49‑1 CATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATT < 1:1559605/49‑1 CATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATT < 1:1261769/49‑1 CATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTAT > 1:1915750/1‑48 ATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTA < 1:2702463/49‑1 CTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAG > 1:1679087/1‑48 CTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAG > 1:1294631/1‑48 AGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCAC < 1:1531095/48‑1 AGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCA < 1:2131795/47‑1 AGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGC < 1:1396929/46‑1 GCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTT < 1:1643179/49‑1 GCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACT < 1:2072273/48‑1 CATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTT > 1:857259/1‑48 ATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTA > 1:526910/1‑49 ATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTA < 1:2104337/49‑1 AAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTAT > 1:18812/1‑48 AAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAA < 1:1834158/49‑1 AACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAAT > 1:739560/1‑49 CAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCA > 1:1098475/1‑49 CAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCA < 1:1400598/49‑1 AAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCAT < 1:1575706/49‑1 AATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATT > 1:2776254/1‑49 GATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAA > 1:726192/1‑49 ATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAAT < 1:100911/49‑1 ATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAA > 1:888407/1‑48 ATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAA < 1:2642928/48‑1 TGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATA < 1:2600509/49‑1 TGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAAT > 1:1773383/1‑48 AATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAA < 1:2090087/49‑1 AATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAA < 1:2813297/48‑1 TAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA > 1:760518/1‑49 AAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA > 1:2840638/1‑48 AGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATA < 1:2842034/49‑1 GGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA > 1:1697405/1‑46 GAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA > 1:1482712/1‑45 AATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGAT < 1:2812063/49‑1 ATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATT > 1:188823/1‑49 TTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTT > 1:309033/1‑49 TTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTT < 1:803991/49‑1 TTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTT > 1:855055/1‑48 TATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTAT > 1:1800617/1‑49 TATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTAT > 1:1894534/1‑49 ATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTAT < 1:660416/48‑1 TATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGT < 1:2659954/49‑1 TATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGT < 1:2480734/49‑1 TATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATG < 1:2146/48‑1 TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3651243‑3651292‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGT > NC_000913/3653715‑3653762 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |