| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,040,801 | T→C | L107L (TTA→CTA) | msrQ → | periplasmic protein‑L‑methionine sulfoxide reductase heme binding subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,040,801 | 0 | T | C | 100.0% | 76.5 / NA | 20 | L107L (TTA→CTA) | msrQ | periplasmic protein‑L‑methionine sulfoxide reductase heme binding subunit |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (10/10); total (10/10) | |||||||||||
TTTAACAAGTTACGCATTGCTGGAGCTGGGCGTGAATAATCTGGCGTTATTAGGTAAGGAGTTAATTACCCGGCCTTATTTAACGTTAGGTA > NC_000913/2040755‑2040846 | tttAACAAGTTACGCATTGCTGGAGCTGGGCGTGAATAATCTGGCGcta < 1:2399234/49‑1 (MQ=255) cAAGTTACGCATTGCTGGAGCTGGGCGTGAATAATCTGGCGCTATTAgg > 1:483803/1‑49 (MQ=255) cAAGTTACGCATTGCTGGAGCTGGGCGTGAATAATCTGGCGCTATTAgg > 1:212947/1‑49 (MQ=255) aCGCATTGCTGGAGCTGGGCGTGAATAATCTGGCGCTATTAGGTAAgg < 1:2856266/48‑1 (MQ=255) cGCATTGCTGGAGCTGGGCGTGAATAATCTGGCGCTATTAGGTAAGGa < 1:2631524/48‑1 (MQ=255) gCATTGCTGGAGCTGGGCGTGAATAATCTGGCGCTATTAGGTAAGGAGt > 1:2362919/1‑49 (MQ=255) cATTGCTGGAGCTGGGCGTGAATAATCTGGCGCTATTAGGTAAGGAGtt < 1:1964322/49‑1 (MQ=255) gCTGGAGCTGGGCGTGAATAATCTGGCGCTATTAGGTAAGGAGTTAAt > 1:1622937/1‑48 (MQ=255) tGGAGCTGGGCGTGAATAATCTGGCGCTATTAGGTAAGGAGTTAATTAc > 1:1233204/1‑49 (MQ=255) cTGGGCGTGAATAATCTGGCGCTATTAGGTAAGGAGTTAATTACCCGGc > 1:2541602/1‑49 (MQ=255) ggCGTGAATAATCTGGCGCTATTAGGTAAGGAGTTAATTACCCGGCCtt < 1:2236184/49‑1 (MQ=255) ggCGTGAATAATCTGGCGCTATTAGGTAAGGAGTTAATTACCCGGCCtt < 1:2727559/49‑1 (MQ=255) ggCGTGAATAATCTGGCGCTATTAGGTAAGGAGTTAATTACCCGGCCtt < 1:2545413/49‑1 (MQ=255) gCGTGAATAATCTGGCGCTATTAGGTAAGGAGTTAATTACCCGGCCTTa < 1:1393526/49‑1 (MQ=255) gTGAATAATCTGGCGCTATTAGGTAAGGAGTTAATTACCCGGCCTTAtt < 1:2122946/49‑1 (MQ=255) gTGAATAATCTGGCGCTATTAGGTAAGGAGTTAATTACCCGGCCTTAtt > 1:1600211/1‑49 (MQ=255) tGAATAATCTGGCGCTATTAGGTAAGGAGTTAATTACCCGGCCTTAtt > 1:1403569/1‑48 (MQ=255) ataatCTGGCGCTATTAGGTAAGGAGTTAATTACCCGGCCTTATTTAAc < 1:1150008/49‑1 (MQ=255) taatCTGGCGCTATTAGGTAAGGAGTTAATTACCCGGCCTTATTTAACg < 1:2330223/49‑1 (MQ=255) taatCTGGCGCTATTAGGTAAGGAGTTAATTACCCGGCCTTATTTAACg > 1:1875505/1‑49 (MQ=255) cTGGCGCTATTAGGTAAGGAGTTAATTACCCGGCCTTATTTAACGTTAg > 1:2044879/1‑49 (MQ=255) gcgcTATTAGGTAAGGAGTTAATTACCCGGCCTTATTTAACGTTa < 1:487046/45‑1 (MQ=255) gcgcTATTAGGTAAGGAGTTAATTACCCGGCCTTATTTAACGTTAGGta > 1:437940/1‑49 (MQ=255) gcgcTATTAGGTAAGGAGTTAATTACCCGGCCTTATTTAACGTTAGGta > 1:1264315/1‑49 (MQ=255) gcgcTATTAGGTAAGGAGTTAATTACCCGGCCTTATTTAACGTTAGGta < 1:796168/49‑1 (MQ=255) | TTTAACAAGTTACGCATTGCTGGAGCTGGGCGTGAATAATCTGGCGTTATTAGGTAAGGAGTTAATTACCCGGCCTTATTTAACGTTAGGTA > NC_000913/2040755‑2040846 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |