Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,829,233	C→A	L97M (CTG→ATG)	xanP →	xanthine:H(+) symporter XanP

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,829,233	0	C	A	100.0%	64.5 / NA	18	L97M (CTG→ATG)	xanP	xanthine:H(+) symporter XanP
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base A (9/9);  total (9/9)

CATCGATTATTCAAATTAAGGCCTGGGGTCCGGTTGGCTCCGGGCTGTTGTCTATTCAGGGCACCAGCTTCAACTTTGTTGCCCCGCTG  >  NC_000913/3829189‑3829277                                             |                                             cATCGATTATTCAAATTAAGGCCTGGGGTCCGGTTGGCTCCGGGAtgtt                                          >  1:1969344/1‑49 (MQ=255)     gATTATTCAAATTAAGGCCTGGGGTCCGGTTGGCTCCGGGATGTTGTc                                       <  1:943221/48‑1 (MQ=255)       ttattCAAATTAAGGCCTGGGGTCCGGTTGGCTCCGGGATGTTGTCTAt                                    <  1:2469890/49‑1 (MQ=255)         attCAAATTAAGGCCTGGGGTCCGGTTGGCTCCGGGATGTTGTCTAtt                                   <  1:2023566/48‑1 (MQ=255)               aTTAAGGCCTGGGGTCCGGTTGGCTCCGGGATGTTGTCTATTCAGGGCa                            >  1:133888/1‑49 (MQ=255)                  aaGGCCTGGGGTCCGGTTGGCTCCGGGATGTTGTCTATTCAGGGCAcc                          <  1:2322994/48‑1 (MQ=255)                      ccTGGGGTCCGGTTGGCTCCGGGATGTTGTCTATTCAGGGCACCAGCtt                     <  1:588868/49‑1 (MQ=255)                       cTGGGGTCCGGTTGGCTCCGGGATGTTGTCTATTCAGGGCACCAGCtt                     >  1:561377/1‑48 (MQ=255)                       cTGGGGTCCGGTTGGCTCCGGGATGTTGTCTATTCAGGGCACCAGCTTc                    <  1:2580150/49‑1 (MQ=255)                        tGGGGTCCGGTTGGCTCCGGGATGTTGTCTATTCAGGGCACCAGCTTc                    >  1:930585/1‑48 (MQ=255)                          gggTCCGGTTGGCTCCGGGATGTTGTCTATTCAGGGCACCAGCTTCAAc                 >  1:2077007/1‑49 (MQ=255)                           ggTCCGGTTGGCTCCGGGATGTTGTCTATTCAGGGCACCAGCTTCAACt                <  1:1544734/49‑1 (MQ=255)                                ggTTGGCTCCGGGATGTTGTCTATTCAGGGCACCAGCTTCAACTttgtt           >  1:2817307/1‑49 (MQ=255)                                 gTTGGCTCCGGGATGTTGTCTATTCAGGGCACCAGCTTCAACTttgttg          >  1:2029527/1‑49 (MQ=255)                                     gCTCCGGGATGTTGTCTATTCAGGGCACCAGCTTCAACTTTGTTGcccc      >  1:1637869/1‑49 (MQ=255)                                         cGGGATGTTGTCTATTCAGGGCACCAGCTTCAACTTTGTTGCCCCGCt   >  1:1107249/1‑48 (MQ=255)                                         cGGGATGTTGTCTATTCAGGGCACCAGCTTCAACTTTGTTGCCCCGCt   <  1:356901/48‑1 (MQ=255)                                         cGGGATGTTGTCTATTCAGGGCACCAGCTTCAACTTTGTTGCCCCGCTg  <  1:715675/49‑1 (MQ=255)                                             |                                             CATCGATTATTCAAATTAAGGCCTGGGGTCCGGTTGGCTCCGGGCTGTTGTCTATTCAGGGCACCAGCTTCAACTTTGTTGCCCCGCTG  >  NC_000913/3829189‑3829277

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑