| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 675,552 | Δ7,819 bp | ybeQ–[hscC] | ybeQ, ybeR, djlB, ybeT, ybeU, djlC, [hscC] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 675552 | 683370 | 7819 | 30 [0] | [0] 32 | ybeQ–[hscC] | ybeQ,ybeR,djlB,ybeT,ybeU,djlC,[hscC] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 675551 | 0 (0.000) | 30 (1.090) | 23/96 | 0.1 | 100% | intergenic (+51/+19) | ybeL/ybeQ | DUF1451 domain‑containing protein YbeL/Sel1 repeat‑containing protein YbeQ |
| ? | NC_000913 | 683371 = | 0 (0.000) | coding (23/1671 nt) | hscC | chaperone protein HscC | |||||
TCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/675504‑675551‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAAG > NC_000913/683371‑683418 TCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCA < 1:573806/49‑1 GATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGG > 1:511916/1‑49 ATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATG < 1:1226293/47‑1 ATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCAT < 1:1354695/46‑1 TTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGC > 1:1113241/1‑47 GCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTT < 1:1549222/49‑1 ACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCT < 1:721338/49‑1 CAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCAT > 1:1211795/1‑49 ATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTA < 1:2016839/49‑1 AGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATT < 1:774964/49‑1 AGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATT < 1:347330/49‑1 AGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATT < 1:126448/49‑1 AATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTG > 1:624960/1‑48 AATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTG > 1:885151/1‑48 TGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTT < 1:1844877/49‑1 TGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATT > 1:262745/1‑48 GGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTA > 1:1847598/1‑48 CCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATAT > 1:1163820/1‑49 GAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCT > 1:1041646/1‑49 TGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTG > 1:2101878/1‑48 AAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAA < 1:930004/48‑1 AATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAG < 1:1103078/49‑1 TTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAA < 1:642892/49‑1 TTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAA < 1:808284/49‑1 TTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAA < 1:1482584/49‑1 TTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAA < 1:980288/49‑1 CCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAA > 1:666020/1‑48 CCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAA < 1:581784/49‑1 CCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAA < 1:797323/49‑1 CATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAAG < 1:477103/49‑1 TCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/675504‑675551‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAAG > NC_000913/683371‑683418 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |