Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 1,400,325 Δ81,931 bp [abgT]–[azoR] 87 genes

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 1400325 1482255 81931 31 [0] [0] 30 [abgT]–[azoR] [abgT],abgB,abgA,abgR,mcaS,smrA,dgcM,zntB,fnrS,ynaL,dbpA,ttcA,intR,xisR,rcbA,ralA,ralR,recT,recE,racC,ydaE,kilR,sieB,ydaF,ydaG,racR,ydaS,ydaT,ydaU,ydaV,ydaW,rzpR,rzoR,trkG,ynaK,ydaY,ynaA,lomR,insH‑5,lomR,stfR,tfaR,pinR,ynaE,ynaM,ttcC,uspF,ompN,micC,ydbK,ydbJ,hslJ,ldhA,ydbH,ynbE,ydbL,feaR,feaB,tynA,paaZ,paaA,paaB,paaC,paaD,paaE,paaF,paaG,paaH,paaI,paaJ,paaK,paaX,paaY,ynbG,ydbA,insD‑2,insC‑2,ydbA,insI‑2,ydbA,pdxI,ydbD,ynbA,ynbB,ynbC,ynbD,[azoR]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 14003240 (0.000)30 (1.090) 24/96 0.0 100% coding (1450/1527 nt) abgT p‑aminobenzoyl glutamate:H(+) symporter
?NC_000913 1482256 = 0 (0.000)coding (605/606 nt) azoR FMN dependent NADH:quinone oxidoreductase

CTATCGGCAGACCGACAAGATACCACGCCAGCAACATCAGCAGCCATAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1400276‑1400324
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TATGCAGAAACAATGCTGTCGATGGCTGCTTTTGCGTCAGACTGT  >  NC_000913/1482256‑1482300
                                                                                              
CTATCGGCAGACCGACAAGATACCACGCCAGC‑ACATC‑GCAGCCATACTA                                             >  1:1034266/1‑49
    CGGCAGACCGACAAGATACCACGCCAGC‑ACATC‑GCAGCCATACTATG                                           >  1:2032410/1‑47
       CAGACCGACAAGATACCACGCCAGC‑ACATC‑GCAGCCATACTATGCAGAA                                      <  1:140347/49‑1
       CAGACCGACAAGATACCACGCCAGC‑ACATC‑GCAGCCATACTATGCAGA                                       >  1:1600555/1‑48
        AGACCGACAAGATACCACGCCAGC‑ACATC‑GCAGCCATACTATGCAGAAA                                     <  1:2055517/49‑1
         GACCGACAAGATACCACGCCAGC‑ACATC‑GCAGCCATACTATGCAGAAAC                                    <  1:1112054/49‑1
         GACCGACAAGATACCACGCCAGC‑ACATC‑GCAGCCATACTATGCAGAAAC                                    <  1:825532/49‑1
          ACCGACAAGATACCACGCCAGC‑ACATC‑GCAGCCATACTATGCAGAAAC                                    >  1:930937/1‑48
           CCGACAAGATACCACGCCAGC‑ACATC‑GCAGCCATACTATGCAGAAACAA                                  <  1:410493/49‑1
            CGACAAGATACCACGCCAGC‑ACATC‑GCAGCCATACTATGCAGAAACAAT                                 >  1:1670933/1‑49
            CGACAAGATACCACGCCAGC‑ACATC‑GCAGCCATACTATGCAGAAACAAT                                 <  1:751789/49‑1
              ACAAGATACCACGCCAGC‑ACATC‑GCAGCCATACTATGCAGAAACAATGC                               >  1:1292828/1‑49
               CAAGATACCACGCCAGC‑ACATC‑GCAGCCATACTATGCAGAAACAATGCT                              <  1:354951/49‑1
                 AGATACCACGCCAGC‑ACATC‑GCAGCCATACTATGCAGAAACAATGCTGT                            <  1:764562/49‑1
                  GATACCACGCCAGC‑ACATC‑GCAGCCATACTATGCAGAGACAATGCTGTC                           <  1:894450/49‑1
                   ATACCACGCCAGC‑ACATC‑GCAGCCATACTATGCAGAAACAATGCTGTCG                          <  1:2088056/49‑1
                    TACCACGCCAGC‑ACATC‑GCAGCCATACTATGCAGAAACAATGCTGTCGA                         >  1:1874669/1‑49
                      CCACGCCAGC‑ACATC‑GCAGCCATACTATGCAGAAACAATGCTGTCGATG                       >  1:1947871/1‑49
                      CCACGCCAGC‑ACATC‑GCAGCCATACTATGCAGAAACAATGCTGTCGATG                       <  1:315428/49‑1
                      CCACGCCAGC‑ACATC‑GCAGCCATACTATGCAGAAACAATGCTGTCGAT                        <  1:1591789/48‑1
                                     tcGCAGCCATACTATGCAGAAACAATGCTGTCGATGGCTGCTTTTGCGT          <  1:1505298/47‑1
                                     tcGCAGCCATACTATGCAGAAACAATGCTGTCGATGGCTGCTTTTGCGT          <  1:453854/47‑1
                                         AGCCATACTATGCAGAAACAATGCTGTCGATGGCTGCTTTTGCGTCAGA      >  1:745297/1‑49
                                           CCATACTATGCAGAAACAATGCTGTCGATGGCTGCTTTTGCGTCAGACT    >  1:113929/1‑49
                                           CCATACTATGCAGAAACAATGCTGTCGATGGCTGCTTTTGCGTCAGACT    <  1:501286/49‑1
                                           CCATACTATGCAGAAACAATGCTGTCGATGGCTGCTTTTGCGTCAGACT    <  1:256658/49‑1
                                            CATACTATGCAGAAACAATGCTGTCGATGGCTGCTTTTGCGTCAGACTG   >  1:478063/1‑49
                                            CATACTATGCAGAAACAATGCTGTCGATGGCTGCTTTTGCGTCAGACTG   >  1:1794164/1‑49
                                            CATACTATGCAGAAACAATGCTGTCGATGGCTGCTTTTGCGTCAGACTG   >  1:1715746/1‑49
                                             ATACTATGCAGAAACAATGCTGTCGATGGCTGCTTTTGCGTCAGACTGT  >  1:888889/1‑49
                                                                                              
CTATCGGCAGACCGACAAGATACCACGCCAGCAACATCAGCAGCCATAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1400276‑1400324
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TATGCAGAAACAATGCTGTCGATGGCTGCTTTTGCGTCAGACTGT  >  NC_000913/1482256‑1482300

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.