| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,509,631 | Δ8,319 bp | [yfeO]–pdeA | [yfeO], ypeC, mntH, nupC, insL‑3, pdeA | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2509631 | 2517949 | 8319 | 26 [0] | [0] 24 | [yfeO]–pdeA | [yfeO],ypeC,mntH,nupC,insL‑3,pdeA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2509630 | 0 (0.000) | 24 (0.880) | 19/96 | 0.2 | 100% | coding (1/1257 nt) | yfeO | putative transport protein YfeO |
| ? | NC_000913 | 2517950 = | 0 (0.000) | intergenic (‑118/+91) | pdeA/alaX | putative c‑di‑GMP phosphodiesterase PdeA/tRNA‑Ala | |||||
CAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2509585‑2509630‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAAA > NC_000913/2517950‑2517996 CAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAG > 1:1124855/1‑49CAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAG < 1:282160/49‑1CAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAG > 1:202126/1‑49CAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAG < 1:1954338/49‑1 GCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCG > 1:659688/1‑49 TGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGG > 1:1917639/1‑48 ACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACC > 1:1648467/1‑49 GTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGAC > 1:1073105/1‑49 CTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACG > 1:759983/1‑46 ACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAG < 1:1512496/46‑1 CCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTG > 1:1728200/1‑49 CCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTG > 1:153475/1‑49 CGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTAT < 1:499699/49‑1 GCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATT < 1:90424/49‑1 CATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTA < 1:1869572/49‑1 TAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTAC > 1:624520/1‑48 AAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACA > 1:1982236/1‑48 AAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACA > 1:128186/1‑48 GAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAG < 1:2025801/49‑1 GAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAG < 1:945391/49‑1 TAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGG < 1:972482/49‑1 GAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGC > 1:1537054/1‑48 AACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAA < 1:549155/49‑1 CACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAAA < 1:1501366/49‑1 CAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2509585‑2509630‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAAA > NC_000913/2517950‑2517996 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |