| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,651,293 | Δ2,422 bp | [yhiS]–yhiS | [yhiS], insH‑11, yhiS | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3651293 | 3653714 | 2422 | 44 [0] | [0] 44 | [yhiS]–yhiS | [yhiS],insH‑11,yhiS |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3651292 | 0 (0.000) | 43 (1.640) | 33/92 | 0.0 | 100% | pseudogene (2/746 nt) | yhiS | putative uncharacterized protein YhiS |
| ? | NC_000913 | 3653715 = | 0 (0.000) | intergenic (+2/‑246) | yhiS/slp | putative uncharacterized protein YhiS/starvation lipoprotein | |||||
TTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3651248‑3651292‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTAT > NC_000913/3653715‑3653760 TTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTG < 1:1394554/49‑1 AACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTA < 1:1187559/49‑1 AACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTA < 1:1331888/49‑1 AACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTA > 1:351149/1‑49 AACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTA < 1:1956283/49‑1 AACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTA < 1:1799448/49‑1 AACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATT < 1:776629/48‑1 AACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATT < 1:21729/48‑1 ATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTA < 1:530769/49‑1 ATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTAT > 1:582509/1‑47 ATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTAT > 1:1635229/1‑47 TTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCA > 1:1118759/1‑49 AGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACT > 1:1921162/1‑49 AGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGC < 1:1296985/46‑1 AGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGC < 1:208070/46‑1 GCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTT < 1:432122/49‑1 CATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTT > 1:985878/1‑48 TAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTA > 1:1442123/1‑48 AAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTAT > 1:813325/1‑48 AAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATA < 1:982903/48‑1 AACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAAT < 1:177937/49‑1 ACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATC < 1:1445787/49‑1 ACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATC < 1:924897/49‑1 ACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAAT > 1:460387/1‑48 AAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCAT > 1:811702/1‑49 AAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCAT < 1:1324682/49‑1 AATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATT > 1:379248/1‑49 TGATGAATAAGGAATTTTATGTTGATTATTAGCACTTTATAATCATTGA < 1:690976/49‑1 TGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGA < 1:1896605/49‑1 GATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAA > 1:680336/1‑49 ATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAA < 1:746005/48‑1 TGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATA < 1:356703/49‑1 TGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATA < 1:1860249/49‑1 AATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAA < 1:2116940/49‑1 AATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAA < 1:86469/49‑1 AATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAA > 1:1562239/1‑48 AATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAA < 1:1617626/48‑1 ATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAA < 1:1537466/49‑1 AAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA > 1:944014/1‑48 GGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAG < 1:1113326/49‑1 GGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA > 1:394104/1‑46 GAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGA < 1:905428/49‑1 AATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGAT > 1:197236/1‑49 ATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTAT < 1:523498/48‑1 TTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3651248‑3651292‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTAT > NC_000913/3653715‑3653760 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |