| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 4,626,183 | (GCG)3→2 | coding (272‑274/1383 nt) | radA → | DNA recombination protein |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 4626176 | 4626178 | 3 | 20 [0] | [0] 20 | radA | DNA recombination protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4626179 = | 0 (0.000) | 18 (0.770) | 17/82 | 0.1 | 100% | coding (268/1383 nt) | radA | DNA recombination protein |
| ? | NC_000913 | = 4626175 | 0 (0.000) | coding (264/1383 nt) | radA | DNA recombination protein | |||||
CCCCGCACCAGGGTTACCGCCAATCAGAATGGCACTTCCTGGCACCACGCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4626232‑4626179‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgccTAGTACGCGGTCGAACTCTTTAAATCCGGTGGAAAAACGCGGCAGC < NC_000913/4626175‑4626130 CCCCGCACCAGGGTTACCGCCAATCAGAATGGCACTTCCTGGCACCAC < 1:278071/48‑1 CCCGCACCAGGGTTGCCGCCAATCAGAATGGCACTTCCTGGCACCACG < 1:2015372/48‑1 CCCGCACCAGGGTTACCGCCAATCAGAATGGCACTTCCTGGCACCACGC < 1:1151528/49‑1 GCACCAGGGTTACCGCCAATCAGAATGGCACTTCCTGGCACCACGCCGC > 1:1160789/1‑49 CCAGGGTTACCGCCAATCAGAATGGCACTTCCTGGCACCACGCCGCCTA < 1:694086/49‑1 AGGGTTACCGCCAATCAGAATGGCACTTCCTGGCACCACGCCGCCTAGT < 1:226006/49‑1 GGTTACCGCCAATCAGAATGGCACTTCCTGGCACCACGCCGCCTAGTAC > 1:2118258/1‑49 GGTTACCGCCAATCAGAATGGCACTTCCTGGCACCACGCCGCCTAGTAC < 1:128439/49‑1 GTTACCGCCAATCAGAATGGCACTTCCTGGCACCACGCCGCCTAGTACG > 1:1067204/1‑49 GCCAATCAGAATGGCACTTCCTGGCACCACGCCGCCTAGTACGCGGTC > 1:1948203/1‑48 TCAGAATGGCACTTCCTGGCACCACGCCGCCTAGTACGCGGTCGAACTC < 1:1971945/49‑1 AGAATGGCACTTCCTGGCACCACGCCGCCTAGTACGCGGTCGAACTCTT < 1:225207/49‑1 AGAATGGCACTTCCTGGCACCACGCCGCCTAGTACGCGGTCGAACTCT < 1:2024287/48‑1 AATGGCACTTCCTGGCACCACGCCGCCTAGTACGCGGTCGAACTCTTTA < 1:1152774/49‑1 GCACTTCCTGGCACCACGCCGCCTAGTACGCGGTCGAACTCTTTAAAT < 1:206339/48‑1 CACTTCCTGGCACCACGCCGCCTAGTACGCGGTCGAACTCTTTAAATCC > 1:2120297/1‑49 CCTGGCACCACGCCGCCTAGTACGCGGTCGAACTCTTTAAATCCGGTG < 1:1619773/48‑1 TGGCACCACGCCGCCTAGTACGCGGTCGAACTCTTTAAATCCGGTGGA > 1:1124138/1‑48 GGCACCACGCCGCCTAGTACGCGGTCGAACTCTTTAAATCCGGTGGAA > 1:109349/1‑48 GCACCATGCCGCCTAGTACGCGGTCGAACTCTTTAAATCCGGTGGAAA < 1:1853335/48‑1 GCACCACGCCGCCTAGTACGCGGTCGAACTCTTTAAATCCGGTGGAAA < 1:1432491/48‑1 ACCACGCCGCCTAGTACGCGGTCGAACTCTTTAAATCCGGTGGAAAAAC < 1:1130489/49‑1 CGCCTAGTACGCGGTCGAACTCTTTAAATCCGGTGGAAAAACGCGGCAG < 1:2037416/49‑1 GCCTAGTACGCGGTCGAACTCTTTAAATCCGGTGGAAAAACGCGGCAGC < 1:1113199/49‑1 CCCCGCACCAGGGTTACCGCCAATCAGAATGGCACTTCCTGGCACCACGCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4626232‑4626179‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgccTAGTACGCGGTCGAACTCTTTAAATCCGGTGGAAAAACGCGGCAGC < NC_000913/4626175‑4626130 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |