| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,416,380 | (TGC)3→2 | coding (1634‑1636/2145 nt) | pta → | phosphate acetyltransferase |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2416374 | 2416376 | 3 | 20 [0] | [2] 21 | pta | phosphate acetyltransferase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2416377 = | 2 (0.070) | 18 (0.750) | 14/84 | 0.3 | 95.4% | coding (1631/2145 nt) | pta | phosphate acetyltransferase |
| ? | NC_000913 | = 2416373 | 0 (0.000) | coding (1627/2145 nt) | pta | phosphate acetyltransferase | |||||
TCAAAACTGCACCGGGCAGCTCCCTGGTATCTTCCGTGTTCTTCATGCTGCTGCCGGAACAGGTTTACGTTTACGGTGACTGTGCGATCAACCCG > NC_000913/2416329‑2416423 | tgatcaaaactgcaccgggcagctccctggtatcttccgtgttcttcat < 1:957041‑M1/1‑1 (MQ=255) aaactgcaccgggcagctccctggtatcttccgtgttcttcaTGCTGcc > 1:379368‑M1/43‑49 (MQ=255) accgggcagctccctggtatcttccgtgttcttcaTGCTGCCGGAACAg > 1:704153‑M1/36‑49 (MQ=255) ggcagctccctggtatcttccgtgttcttcaTGCTGCCGGAACAGgttt > 1:1827111‑M1/32‑49 (MQ=255) ggcagctccctggtatcttccgtgttcttcaTGCTGCCGGAACAGgtt < 1:1552613‑M1/17‑1 (MQ=255) cctggtatcttccgtgttcttcaTGCTGCCGGAACAGgtttacgttta > 1:494648‑M1/24‑48 (MQ=255) gtatcttccgtgttcttcaTGCTGCCGGAACAGGTTTACGTTTACGGt < 1:17745‑M1/29‑1 (MQ=255) ccgtgttcttcaTGCTGCCGGAACAGGTTTACGTTTACGGTGACt > 1:932254‑M1/13‑45 (MQ=255) cgtgttcttcaTGCTGCCGGAACAGGTTTACGTTTACGGTGACTGTGCg > 1:1623602‑M1/12‑49 (MQ=255) cgtgttcttcaTGCTGCCGGAACAGGTTTACGTTTACGGTGACTGTGCg > 1:734538‑M1/12‑49 (MQ=255) tgttcttcaTGCTGCCGGAACAGGTTTACGTTTACGGTGACTGTGCGAt > 1:848418‑M1/10‑49 (MQ=255) tcttcaTGCTGCCGGAACAGGTTTACGTTTACGGTGACTGTGCGATCaa < 1:1173781‑M1/43‑1 (MQ=255) tcttcaTGCTGCCGGAACAGGTTTACGTTTACGGTGACTGTGCGATCaa < 1:826830‑M1/43‑1 (MQ=255) ttcaTGCTGCCGGAACAGGTTTACGTTTACGGTGACTGTGCGATCAAcc < 1:420179‑M1/45‑1 (MQ=255) gctgctgcCGGAACAGGTTTACGTTTACGGTGACTGTGCGATCAACCCg > 1:1955288/1‑49 (MQ=255) caTGCTGCCGGAACAGGTTTACGTTTACGGTGACTGTGCGATCAAccc > 1:1453516‑M1/3‑48 (MQ=255) caTGCTGCCGGAACAGGTTTACGTTTACGGTGACTGTGCGATCAAcc > 1:990481‑M1/3‑47 (MQ=255) caTGCTGCCGGAACAGGTTTACGTTTACGGTGACTGTGCGATCAAcc > 1:1226030‑M1/3‑47 (MQ=255) caTGCTGCCGGAACAGGTTTACGTTTACGGTGACTGTGCGATCAACCCg < 1:946689‑M1/47‑1 (MQ=255) caTGCTGCCGGAACAGGTTTACGTTTACGGTGACTGTGCGATCAACCCg < 1:1667413‑M1/47‑1 (MQ=255) ctgctgcCGGAACAGGTTTACGTTTACGGTGACTGTGCGATCAACCCg < 1:361225/48‑1 (MQ=255) | TCAAAACTGCACCGGGCAGCTCCCTGGTATCTTCCGTGTTCTTCATGCTGCTGCCGGAACAGGTTTACGTTTACGGTGACTGTGCGATCAACCCG > NC_000913/2416329‑2416423 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |