| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2066304 | NA (NA) | 30 (1.090) | 24/96 | 0.0 | 100% | noncoding (1050/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 2080592 = | 0 (0.000) | intergenic (‑1/+197) | yeeA/sbmC | putative transporter YeeA/DNA gyrase inhibitor | |||||
GTATACCCGGATTTCAAACGGGCTTAATGACTTATCGGCACGCACGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTC > NC_000913/2080547‑2080637 | ctatttagaccgtttcttcgccatttaaggcgttatccccagtttg > 1:2087457‑M2/46‑46 (MQ=255) tatttagaccgtttcttcgccatttaaggcgttatccccagtttGCAg > 1:1075928‑M2/45‑48 (MQ=255) tatttagaccgtttcttcgccatttaaggcgttatccccagtttGCAg > 1:1648630‑M2/45‑48 (MQ=255) tttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGaaa > 1:197911‑M2/43‑49 (MQ=255) tttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGaaa < 1:1687024‑M2/7‑1 (MQ=255) gactgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTcc > 1:1192099‑M2/39‑49 (MQ=255) gaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTcc > 1:1192117‑M2/39‑49 (MQ=255) ccgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGt < 1:853245‑M2/13‑1 (MQ=255) gtttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTaa > 1:804771‑M2/35‑49 (MQ=255) gtttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTaa > 1:55994‑M2/35‑49 (MQ=255) tttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAAt < 1:1071365‑M2/16‑1 (MQ=255) tcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAAt > 1:1726646‑M2/32‑47 (MQ=255) tcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATg < 1:297530‑M2/17‑1 (MQ=255) cttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAAt > 1:307871‑M2/31‑46 (MQ=255) catttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTaaa < 1:1564822‑M2/25‑1 (MQ=255) catttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTaa > 1:152036‑M2/25‑48 (MQ=255) ttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAgc > 1:1747952‑M2/22‑49 (MQ=255) aaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAgcgc > 1:1250830‑M2/20‑49 (MQ=255) aggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCt > 1:53489‑M2/19‑49 (MQ=255) cgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCAt < 1:194102‑M2/34‑1 (MQ=255) tatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAAc > 1:1015413‑M2/13‑49 (MQ=255) tatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAAc > 1:1950371‑M2/13‑49 (MQ=255) atccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAAc < 1:675074‑M2/37‑1 (MQ=255) cccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCAt > 1:1695108‑M2/9‑49 (MQ=255) ccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATc < 1:1298746‑M2/42‑1 (MQ=255) ccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATc > 1:1257052‑M2/8‑49 (MQ=255) cagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCt > 1:1230333‑M2/7‑49 (MQ=255) tttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTc < 1:1230356‑M2/46‑1 (MQ=255) tttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTc < 1:119866‑M2/46‑1 (MQ=255) tttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTc < 1:962809‑M2/46‑1 (MQ=255) | GTATACCCGGATTTCAAACGGGCTTAATGACTTATCGGCACGCACGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTC > NC_000913/2080547‑2080637 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |