| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,720,634 | Δ1,442 bp | IS150‑mediated | insJ–insK | insJ, insK |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3720634 | 3722075 | 1442 | 27 [0] | [0] 26 | insJ–insK | insJ,insK |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3720633 | 0 (0.000) | 26 (0.950) | 20/96 | 0.1 | 100% | noncoding (1/1443 nt) | IS150 | repeat region |
| ? | NC_000913 | 3722076 = | 0 (0.000) | intergenic (+27/+252) | insK/glyS | IS150 conserved protein InsB/glycine‑‑tRNA ligase subunit beta | |||||
ACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCG > NC_000913/3722029‑3722121 | atatttctgcgcattcccagcctcctgtgttgatttccaacgagtataa > 1:432446‑M2/48‑49 (MQ=255) atttctgcgcattcccagcctcctgtgttgatttccaacgagtatAACt > 1:1855694‑M2/46‑49 (MQ=255) tttctgcgcattcccagcctcctgtgttgatttccaacgagtatAACtt < 1:261961‑M2/5‑1 (MQ=255) ttctgcgcattcccagcctcctgtgttgatttccaacgagtatAACttt > 1:311985‑M2/44‑49 (MQ=255) gcgcattcccagcctcctgtgttgatttccaacgagtatAACTTTGAtt > 1:435310‑M2/40‑49 (MQ=255) cgcattcccagcctcctgtgttgatttccaacgagtatAACTTTGAttt < 1:1071865‑M2/11‑1 (MQ=255) cgcattcccagcctcctgtgttgatttccaacgagtatAACTTTGAt < 1:1209850‑M2/9‑1 (MQ=255) gcattcccagcctcctgtgttgatttccaacgagtatAACTTTGATTta > 1:1072829‑M2/38‑49 (MQ=255) gcattcccagcctcctgtgttgatttccaacgagtatAACTTTGATTta > 1:62626‑M2/38‑49 (MQ=255) gcattcccagcctcctgtgttgatttccaacgagtatAACTTTGATTta < 1:1852175‑M2/12‑1 (MQ=255) gcattcccagcctcctgtgttgatttccaacgagtatAACTTTGATTta > 1:2000900‑M2/38‑49 (MQ=255) cattcccagcctcctgtgttgatttccaacgagtatAACTTTGATTtat < 1:240735‑M2/13‑1 (MQ=255) attcccagcctcctgtgttgatttccaacgagtatAACTTTGATTta > 1:463871‑M2/36‑47 (MQ=255) tcccagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAGt > 1:948357‑M2/34‑49 (MQ=255) ccagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAGTc < 1:777705‑M2/17‑1 (MQ=255) ctcctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTgg < 1:243205‑M2/23‑1 (MQ=255) tgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCtt < 1:1834733‑M2/28‑1 (MQ=255) tgatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTtct > 1:1555033‑M2/18‑49 (MQ=255) gatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTtct < 1:766645‑M2/32‑1 (MQ=255) ccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCtctgtct > 1:574035‑M2/12‑49 (MQ=255) acgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGcc > 1:1193137‑M2/9‑49 (MQ=255) gagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCtt < 1:1332663‑M2/43‑1 (MQ=255) gagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCtt < 1:1173565‑M2/43‑1 (MQ=255) gtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTc < 1:684465‑M2/45‑1 (MQ=255) gtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTc > 1:80082‑M2/5‑49 (MQ=255) tatAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCg > 1:1467771‑M2/4‑49 (MQ=255) | ACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCG > NC_000913/3722029‑3722121 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |