Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,811,208	T→C	V92A (GTT→GCT)	tcyP →	cystine/sulfocysteine:cation symporter

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,811,208	0	T	C	100.0%	109.4 / NA	29	V92A (GTT→GCT)	tcyP	cystine/sulfocysteine:cation symporter
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (11/18);  total (11/18)

AAATGATCGTTATGCCGTTAGTCTTCGCCTCTATTCTGAGCGCGGTTGCCCGTCTGCATAACGCATCTCAGTTAGGCAAAATCAGTTTTCT  >  NC_000913/1811163‑1811253                                              |                                              aaaTGATCGTTATGCCGTTAGTCTTCGCCTCTATTCTGAGCGCGGCTGc                                            >  1:1681262/1‑49 (MQ=255)  aaTGATCGTTATGCCGTTAGTCTTCGCCTCTATTCTGAGCGCGGCTGcc                                           <  1:804080/49‑1 (MQ=255)    tGATCGTTATGCCGTTAGTCTTCGCCTCTATTCTGAGCGCGGCTGCCCg                                         <  1:1888786/49‑1 (MQ=255)     gATCGTTATGCCGTTAGTCTTCGCCTCTATTCTGAGCGCGGCTGCCCGt                                        >  1:1877090/1‑49 (MQ=255)           tATGCCGTTAGTCTTCGCCTCTATTCTGAGCGCGGCTGCCCGTCTGCa                                   >  1:1408505/1‑48 (MQ=255)            aTGCCGTTAGTCTTCGCCTCTATTCTGAGCGCGGCTGCCCGTCTGCAt                                  >  1:1280418/1‑48 (MQ=255)             tGCCGTTAGTCTTCGCCTCTATTCTGAGCGCGGCTGCCCGTCTGCATaa                                <  1:1225762/49‑1 (MQ=255)             tGCCGTTAGTCTTCGCCTCTATTCTGAGCGCGGCTGCCCGTCTGCATaa                                <  1:572060/49‑1 (MQ=255)             tGCCGTTAGTCTTCGCCTCTATTCTGAGCGCGGCTGCCCGTCTGCATa                                 <  1:1336038/48‑1 (MQ=255)             tGCCGTTAGTCTTCGCCTCTATTCTGAGCGCGGCTGCCCGTCTGCATa                                 <  1:1964066/48‑1 (MQ=255)                cGTTAGTCTTCGCCTCTATTCTGAGCGCGGCTGCCCGTCTGCATAACGc                             <  1:853268/49‑1 (MQ=255)                 gTTAGTCTTCGCCTCTATTCTGAGCGCGGCTGCCCGTCTGCATAACGCa                            >  1:1029646/1‑49 (MQ=255)                 gTTAGTCTTCGCCTCTATTCTGAGCGCGGCTGCCCGTCTGCATAACGCa                            >  1:2120648/1‑49 (MQ=255)                  ttAGTCTTCGCCTCTATTCTGAGCGCGGCTGCCCGTCTGCATAACGCAt                           <  1:960091/49‑1 (MQ=255)                    aGTCTTCGCCTCTATTCTGAGCGCGGCTGCCCGTCTGCATAACGCAtc                          <  1:2121767/48‑1 (MQ=255)                     gTCTTCGCCTCTATTCTGAGCGCGGCTGCCCGTCTGCATAACGCAtctc                        <  1:2067532/49‑1 (MQ=255)                     gTCTTCGCCTCTATTCTGAGCGCGGCTGCCCGTCTGCATAACGCAtctc                        <  1:427485/49‑1 (MQ=255)                          cGCCTCTATTCTGAGCGCGGCTGCCCGTCTGCATAACGCATCTCAGtt                    <  1:1111584/48‑1 (MQ=255)                          cGCCTCTATTCTGAGCGCGGCTGCCCGTCTGCATAACGCATCTCAGt                     >  1:1314420/1‑47 (MQ=255)                           gCCTCTATTCTGAGCGCGGCTGCCCGTCTGCATAACGCATCTCAGTTAg                  >  1:1821902/1‑49 (MQ=255)                           gCCTCTATTCTGAGCGCGGCTGCCCGTCTGCATAACGCATCTCAGTTAg                  <  1:35553/49‑1 (MQ=255)                            ccTCTATTCTGAGCGCGGCTGCCCGTCTGCATAACGCATCTCAGTTAgg                 <  1:1286339/49‑1 (MQ=255)                              tctATTCTGAGCGCGGCTGCCCGTCTGCATAACGCATCTCAGTTAGGc                >  1:2099645/1‑48 (MQ=255)                                tataCTGAGCGCGGCTGCCCGTCTGCATAACGCATCTCAGTTAGGCa               <  1:910411/47‑1 (MQ=255)                                  ttCTGAGCGCGGCTGCCCGTCTGCATAACGCATCTCAGTTAGGCAAAAt           >  1:1738770/1‑49 (MQ=255)                                  ttCTGAGCGCGGCTGCCCGTCTGCATAACGCATCTCAGTTAGGCAAAAt           <  1:784906/49‑1 (MQ=255)                                   tCTGAGCGCGGCTGCCCGTCTGCATAACGCATCTCAGTTAGGCAAAAt           >  1:1765018/1‑48 (MQ=255)                                          gcgGCTGCCCGTCTGCATAACGCATCTCAGTTAGGCAAAATCAGTTTTc   <  1:1913487/49‑1 (MQ=255)                                           cgGCTGCCCGTCTGCATAACGCATCTCAGTTAGGCAAAATCAGTTTTCt  <  1:1099740/49‑1 (MQ=255)                                              |                                              AAATGATCGTTATGCCGTTAGTCTTCGCCTCTATTCTGAGCGCGGTTGCCCGTCTGCATAACGCATCTCAGTTAGGCAAAATCAGTTTTCT  >  NC_000913/1811163‑1811253

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑