Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_000913 | 388,654 | Δ1 bp | intergenic (+8/+99) | tauD → / ← hemB | taurine dioxygenase/porphobilinogen synthase |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 388,654 | 0 | G | . | 100.0% | 63.5 / NA | 14 | intergenic (+8/+99) | tauD/hemB | taurine dioxygenase/porphobilinogen synthase |
Reads supporting (aligned to +/- strand): ref base G (0/0); new base . (9/5); total (9/5) |
GATCCTTGGGGATAAACCGTTTTATCGGGCGGGGTAATACGAGAGTGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGTGA > NC_000913/388610‑388695 | aatttccaggtcagacgggctgcaagttgcagaccgttaCGAGA‑TGGAc < 1:1730751‑M2/10‑1 (MQ=255) atttccaggtcagacgggctgcaagttgcagaccgttaCGAGA‑TGGACg > 1:109416‑M2/39‑49 (MQ=255) ttccaggtcagacgggctgcaagttgcagaccgttaCGAGA‑TGGACGGt > 1:2074275‑M2/37‑49 (MQ=255) aggtcagacgggctgcaagttgcagaccgttaCGAGA‑TGGACGGTcccc < 1:207698‑M2/17‑1 (MQ=255) tcagacgggctgcaagttgcagaccgttaCGAGA‑TGGACGGTCCCCTCg > 1:721071‑M2/30‑49 (MQ=255) tcagacgggctgcaagttgcagaccgttaCGAGA‑TGGACGGTCCCCTCg > 1:820941‑M2/30‑49 (MQ=255) aagttgcagaccgttaCGAGA‑TGGACGGTCCCCTCGCCCCCTTggg > 1:656560‑M2/17‑46 (MQ=255) ttgcagaccgttaCGAGA‑TGGACGGTCCCCTCGCCCCCTTGGGGAGAgg > 1:1353254‑M2/14‑49 (MQ=255) cagaccgttaCGAGA‑TGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGt < 1:1134194‑M2/38‑1 (MQ=255) cagaccgttaCGAGA‑TGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGt > 1:215392‑M2/11‑48 (MQ=255) agaccgttaCGAGA‑TGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGt > 1:1751908‑M2/10‑47 (MQ=255) gttaCGAGA‑TGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGTg < 1:288851‑M2/45‑1 (MQ=255) ttaCGAGA‑TGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGt > 1:1412954‑M2/4‑47 (MQ=255) ttaCGAGA‑TGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGTGa < 1:884083‑M2/46‑1 (MQ=255) | GATCCTTGGGGATAAACCGTTTTATCGGGCGGGGTAATACGAGAGTGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGTGA > NC_000913/388610‑388695 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |