| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,400,309 | Δ1 bp | coding (1465/1527 nt) | abgT ← | p‑aminobenzoyl glutamate:H(+) symporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,400,308 | 0 | A | . | 100.0% | 76.8 / NA | 17 | coding (1466/1527 nt) | abgT | p‑aminobenzoyl glutamate:H(+) symporter |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base . (11/6); total (11/6) | |||||||||||
GGTAAATACCCGGACCTATCGGCAGACCGACAAGATACCACGCCAGCAACATCAGCAGCCATACCACCAAAAAGATAAGTGGATAGGGCAAG > NC_000913/1400261‑1400352 | ggTAAATACCCGGACCTATCGGCAGACCGACAAGATACCACGCCAGCac < 1:1725730/49‑2 (MQ=255) gTAAATACCCGGACCTATCGGCAGACCGACAAGATACCACGCCAGCaca < 1:1563867/49‑3 (MQ=255) ccGGACCTATCGGCAGACCGACAAGATACCACGCCAGC‑ACATC‑GCAGcc < 1:840601/49‑1 (MQ=38) ggACCTATCGGCAGACCGACAAGATACCACGCCAGC‑ACATC‑GCAGCCAt < 1:2102725/49‑1 (MQ=38) cctATCGGCAGACCGACAAGATACCACGCCAGC‑ACATC‑GCAGCCATACt < 1:478480‑M1/48‑2 (MQ=255) aTCGGCAGACCGACAAGATACCACGCCAGC‑ACATC‑GCAGCCATACtatg > 1:1898400‑M1/1‑45 (MQ=255) ggCAGACCGACAAGATACCACGCCAGC‑ACATC‑GCAGCCATACtatg > 1:1882518‑M1/1‑42 (MQ=255) cAGACCGACAAGATACCACGCCAGC‑ACATC‑GCAGCCATACtatgcaga > 1:1371263‑M1/1‑40 (MQ=255) aCCGACAAGATACCACGCCAGC‑ACATC‑GCAGCCATACtatgcagaaac > 1:1280449‑M1/1‑37 (MQ=255) cAAGATACCACGCCAGC‑ACATC‑GCAGCCATACtatgcagaaacaatgct > 1:1152491‑M1/1‑32 (MQ=255) aaGATACCACGCCAGC‑ACATC‑GCAGCCATACtatgcagaaacaatgctg > 1:192147‑M1/1‑31 (MQ=255) aGATACCACGCCAGC‑ACATC‑GCAGCCATACtatgcagaaacaatgctgt < 1:1359649‑M1/49‑20 (MQ=255) aTACCACGCCAGC‑ACATC‑GCAGCCATACtatgcagaaacaatgctgtcg < 1:1207274‑M1/49‑22 (MQ=255) aTACCACGCCAGC‑ACATC‑GCAGCCATACtatgcagaaacaatgctgtcg < 1:1305018‑M1/49‑22 (MQ=255) aTACCACGCCAGC‑ACATC‑GCAGCCATACtatgcagaaacaatgctgtc > 1:163659‑M1/1‑28 (MQ=255) aCCACGCCAGC‑ACATC‑GCAGCCATACtatgcagaaacaatgctgtcgat > 1:424227‑M1/1‑26 (MQ=255) aCCACGCCAGC‑ACATC‑GCAGCCATACtatgcagaaacaatgctgtcgat > 1:1192822‑M1/1‑26 (MQ=255) gCCAGC‑ACATC‑GCAGCCATACtatgcagaaacaatgctgtcgatggctg > 1:29936‑M1/1‑21 (MQ=255) gCCAGC‑ACATC‑GCAGCCATACtatgcagaaacaatgctgtcgatggctg > 1:1598266‑M1/1‑21 (MQ=255) | GGTAAATACCCGGACCTATCGGCAGACCGACAAGATACCACGCCAGCAACATCAGCAGCCATACCACCAAAAAGATAAGTGGATAGGGCAAG > NC_000913/1400261‑1400352 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |