| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 167,484 | Δ5,964 bp | [fhuA]–fhuB | [fhuA], fhuC, fhuD, fhuB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 167484 | 173447 | 5964 | 34 [0] | [0] 33 | [fhuA]–fhuB | [fhuA],fhuC,fhuD,fhuB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 167483 | 0 (0.000) | 33 (1.220) | 25/96 | 0.0 | 100% | intergenic (+219/‑1) | mrcB/fhuA | peptidoglycan glycosyltransferase/peptidoglycan DD‑transpeptidase MrcB/ferrichrome outer membrane transporter/phage receptor |
| ? | NC_000913 | 173448 = | 0 (0.000) | intergenic (+4/+154) | fhuB/hemL | iron(III) hydroxamate ABC transporter membrane subunit/glutamate‑1‑semialdehyde aminotransferase | |||||
ATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/167437‑167483‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTAC > NC_000913/173448‑173491 ATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATT < 1:406868/49‑1 TCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTC < 1:1186255/49‑1 TCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTC > 1:331022/1‑49 ATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCA > 1:404836/1‑49 ATTCTCGTTTACGTTAACATTCACTTTACATCAGAGATATACCATACC < 1:1354244/48‑1 CTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATA < 1:1205441/48‑1 CTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATA < 1:1658203/48‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAAC > 1:826444/1‑49 TTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACG < 1:598017/49‑1 TTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACG > 1:445685/1‑49 TTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACG < 1:188798/49‑1 GTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCT < 1:1257853/49‑1 GTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCT < 1:647258/49‑1 TATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTG > 1:995966/1‑48 TCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTAC < 1:183268/49‑1 TCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTA < 1:402410/48‑1 TTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCC < 1:1587674/49‑1 ACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTG > 1:296447/1‑48 CTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGA > 1:1678083/1‑49 ACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGA > 1:1944758/1‑49 ACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGA > 1:1287392/1‑49 CATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGAT < 1:72292/49‑1 AGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAG > 1:537066/1‑49 AGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAG > 1:1384172/1‑49 AGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAG > 1:745666/1‑49 AGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAG > 1:1041533/1‑49 GAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGC > 1:1743411/1‑49 AGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCG > 1:334918/1‑49 GATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGT > 1:1854702/1‑49 ATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTT > 1:284888/1‑49 ATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTT < 1:1515884/49‑1 TACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTAC > 1:930974/1‑49 TACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTA < 1:1469368/48‑1 ATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/167437‑167483‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTAC > NC_000913/173448‑173491 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |