| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 389,898 | Δ9,908 bp | yaiT–[yaiZ] | yaiT, insF‑2, insE‑2, yaiT, iprA, ampH, sbmA, yaiW, yaiY, [yaiZ] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 389898 | 399805 | 9908 | 45 [0] | [0] 51 | yaiT–[yaiZ] | yaiT,insF‑2,insE‑2,yaiT,iprA,ampH,sbmA,yaiW,yaiY,[yaiZ] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 389897 | 0 (0.000) | 45 (1.660) | 31/96 | 0.0 | 100% | intergenic (‑170/‑354) | hemB/yaiT | porphobilinogen synthase/putative autotransporter YaiT |
| ? | NC_000913 | 399806 = | 0 (0.000) | intergenic (+1/+23) | yaiZ/ddlA | DUF2754 domain‑containing protein YaiZ/D‑alanine‑‑D‑alanine ligase A | |||||
ATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/389851‑389897‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGT > NC_000913/399806‑399851 ATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTG < 1:67438/48‑1 TAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAA > 1:644988/1‑49 TAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAA < 1:596652/49‑1 GAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATA > 1:1518178/1‑49 GAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAAT < 1:769465/48‑1 GAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAAT < 1:1269447/48‑1 AAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATAT > 1:2052477/1‑49 ACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTA > 1:1031882/1‑49 ACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTA > 1:1134151/1‑49 CAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTAT < 1:228028/49‑1 AGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATC > 1:413109/1‑49 GCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCG < 1:1426095/49‑1 CAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGG < 1:807949/49‑1 AATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGG < 1:14521/49‑1 ATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGC > 1:1706931/1‑49 ATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATTGGGCGT > 1:1439841/1‑48 ATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGT > 1:148134/1‑48 TTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTA < 1:1571235/49‑1 TTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTA > 1:62144/1‑48 TATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAA > 1:847807/1‑49 TATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAA > 1:377042/1‑49 TATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAA > 1:1626348/1‑49 TATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAA < 1:213046/48‑1 TATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAA < 1:1365574/48‑1 TTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATT < 1:1997104/49‑1 TTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATT < 1:1797633/49‑1 TTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATAT < 1:862417/48‑1 TCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTA > 1:635950/1‑49 TCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTA > 1:577173/1‑49 AAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATT < 1:1411737/47‑1 AAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGag > 1:1723800/1‑47 AAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTG > 1:1105757/1‑49 AATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGG < 1:653775/49‑1 ATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGT > 1:558201/1‑49 ATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGT < 1:1479890/49‑1 ATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTT > 1:459635/1‑49 ATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTT > 1:276403/1‑49 ATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTT > 1:2097682/1‑49 ATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTT > 1:669715/1‑49 TTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTT < 1:2065039/49‑1 TTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTC < 1:204551/48‑1 TTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTC < 1:1278014/48‑1 AATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAAT < 1:2053105/48‑1 AATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAAT < 1:978787/48‑1 TTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGT > 1:96356/1‑48 ATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/389851‑389897‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGT > NC_000913/399806‑399851 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |