| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,388,889 | Δ9,734 bp | ycjG–[uspE] | ycjG, mpaA, ymjC, ymjD, ycjY, pgrR, mppA, ynaI, insH‑4, ynaJ, [uspE] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1388889 | 1398622 | 9734 | 34 [0] | [0] 34 | ycjG–[uspE] | ycjG,mpaA,ymjC,ymjD,ycjY,pgrR,mppA,ynaI,insH‑4,ynaJ,[uspE] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1388888 | 0 (0.000) | 34 (1.280) | 30/94 | 0.0 | 100% | intergenic (‑77/‑42) | tpx/ycjG | lipid hydroperoxide peroxidase/L‑Ala‑D/L‑Glu epimerase |
| ? | NC_000913 | 1398623 = | 0 (0.000) | intergenic (‑1/+151) | uspE/fnr | universal stress protein with a role cellular motility/DNA‑binding transcriptional dual regulator FNR | |||||
CGTCACACCTAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1388841‑1388888‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tACAGGGTCTCCTTACAACAACTGTCAACGCAGTTTGTAATTAAAAGA > NC_000913/1398623‑1398669 CGTCACACCTAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATTA > 1:846839/1‑49CGTCACACCTAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATTA > 1:1980011/1‑49CGTCACACCTAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATTA > 1:154172/1‑49 TCACACCTAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATTACA < 1:256518/49‑1 CCTAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATTACAGGGTC > 1:1205057/1‑49 CTAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATTACAGGGTCT < 1:263638/49‑1 CTAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATTACAGGGTCT > 1:1412389/1‑49 AGTTTATGCTAACTGTCAATAACACAGCAAACGCTATTACAGGGTCTCC > 1:1577847/1‑49 GTTTATGCTAACTGTCAATAACACAGCAAACGCTATTACAGGGTCTC < 1:1791304/47‑1 TGCTAACTGTCAATAACACAGCAAACGCTATTACAGGGTCTCCTTACAA < 1:386715/49‑1 GCTAACTGTCAATAACACAGCAAACGCTATTACAGGGTCTCCTTACAA > 1:1875261/1‑48 CTAACTGTCAATAACACAGCAAACGCTATTACAGGGTCTCCTTACAAC > 1:1021904/1‑48 ACTGTCAATAACACAGCAAACGCTATTACAGGGTCTCCTTACAACAACT < 1:1085723/49‑1 ACTGTCAATAACACAGCAAACGCTATTACAGGGTCTCCTTACAACAAC < 1:1262167/48‑1 CTGTCAATAACACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTG < 1:240727/49‑1 GTCAATAACACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGT > 1:1150864/1‑48 TCAATAACACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGTC < 1:1401382/48‑1 TCAATAACACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGT < 1:1126247/47‑1 AATAACACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGTCAAC < 1:1933860/49‑1 AATAACACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGTCAAC < 1:1549308/49‑1 AATAACACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGTCAA < 1:131178/48‑1 TAACACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGTCAACGC < 1:2020014/49‑1 ACACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGTCAACGCA < 1:248752/48‑1 CACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGTCAACGCAGT < 1:1302573/49‑1 CACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGTCAACGCAGT > 1:1953228/1‑49 ACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGTCAACGCAGTT < 1:1225132/49‑1 CAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGTCAACGCAGTTT > 1:1579669/1‑49 CAAACGCTATTACAGGGTCTCCTTACAACAACTGTCAACGCAGTTTGTA < 1:1741485/49‑1 AAACGCTATTACAGGGTCTCCTTACAACAACTGTCAACGCAGTTTGTAA < 1:1621099/49‑1 AAACGCTATTACAGGGTCTCCTTACAACAACTGTCAACGCAGTTTGTAA > 1:1212052/1‑49 AAACGCTATTACAGGGTCTCCTTACAACAACTGTCAACGCAGTTTGTAA < 1:156368/49‑1 CGCTATTACAGGGTCTCCTTACAACAACTGTCAACGCAGTTTGTAATTA < 1:553651/49‑1 CTATTACAGGGTCTCCTTACAACAACTGTCAACGCAGTTTGTAATTAA > 1:362598/1‑48 TTACAGGGTCTCCTTACAACAACTGTCAACGCAGTTTGTAATTAAAAGA < 1:278533/49‑1 CGTCACACCTAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1388841‑1388888‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tACAGGGTCTCCTTACAACAACTGTCAACGCAGTTTGTAATTAAAAGA > NC_000913/1398623‑1398669 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |