Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 1,627,518 Δ25,244 bp [ydfG]–[ynfP] 48 genes

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 1627518 1652761 25244 36 [0] [0] 37 [ydfG]–[ynfP] [ydfG],ydfH,ydfZ,ydfI,ydfJ,ynfT,ydfK,pinQ,tfaQ,ydfN,nohA,ynfO,ydfO,gnsB,ynfN,ynfR,ynfQ,cspI,rzpQ,rzoQ,rrrQ,ydfR,essQ,cspB,cspF,ynfS,ydfT,ydfU,rem,hokD,relE,relB,ydfV,flxA,ydfW,ydfX,dicC,dicA,ydfA,ydfB,ydfC,dicF,dicB,ydfD,ydfE,insD‑7,intQ,[ynfP]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 16275170 (0.000)36 (1.360) 27/94 0.0 100% coding (1/747 nt) ydfG 3‑hydroxy acid dehydrogenase
?NC_000913 1652762 = 0 (0.000)coding (77/111 nt) ynfP protein YnfP

CCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1627473‑1627517
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCACCAAATCCTT  >  NC_000913/1652762‑1652808
                                                                                            
CCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAAGCG                                             >  1:153199/1‑49
 CGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAAGCG                                             >  1:1931599/1‑48
  GTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAAGCGCA                                           <  1:337602/49‑1
  GTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAAGCG                                             >  1:204880/1‑47
  GTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAAGCG                                             >  1:861260/1‑47
   TGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAAGCGCAG                                          <  1:999036/49‑1
     CTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAAGCGCAGTG                                        <  1:77131/49‑1
     CTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAAGCGCAGTG                                        <  1:1502189/49‑1
      TATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAAGCGCAGTGC                                       >  1:1320488/1‑49
      TATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAAGCGCAGTGC                                       >  1:1604935/1‑49
      TATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAAGCGCAGTGC                                       >  1:800213/1‑49
       ATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAAGCGCAGTGCC                                      >  1:1959035/1‑49
        TGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAAGCGCAGTGCC                                      >  1:536998/1‑48
          TTATTGACACACAAAAGCGTTGAGGAACAGTGAGAAGCGCAGTGCCCAG                                   >  1:1293289/1‑49
          TTATTGACACACAAAAGCGTTGAGGAACAGTGAGAAGCGCAGTGCCCAG                                   >  1:212722/1‑49
          TTATTGACACACAAAAGCGTTGAGGAACAGTGAGAAGCGCAGTGCCCAG                                   <  1:195921/49‑1
           TATTGACACACAAAAGCGTTGAGGAACAGTGAGAAGCGCAGTGCCCAGC                                  >  1:68674/1‑49
            ATTGACACACAAAAGCGTTGAGGAACAGTGAGAAGCGCAGTGCCCAGC                                  >  1:787094/1‑48
              TGACACACAAAAGCGTTGAGGAACAGTGAGAAGCGCAGTGCCCAGCCAT                               >  1:118275/1‑49
                ACACACAAAAGCGTTGAGGAACAGTGAGAAGCGCAGTGCCCAGCCATC                              <  1:31366/48‑1
                 CACACAAAAGCGTTGAGGAACAGTGAGAAGCGCAGTGCCCAGCCATCCC                            <  1:1481325/49‑1
                   CACAAAAGCGTTGAGGAACAGTGAGAAGCGCAGTGCCCAGCCATCCCGA                          <  1:479518/49‑1
                   CACAAAAGCGTTGAGGAACAGTGAGAAGCGCAGTGCCCAGCCATCCCGA                          >  1:140208/1‑49
                    ACAAAAGCGTTGAGGAACAGTGAGAAGCGCAGTGCCCAGCCATCCCGAT                         <  1:1888854/49‑1
                    ACAAAAGCGTTGAGGAACAGTGAGAAGCGCAGTGCCCAGCCATCCCGAT                         <  1:854373/49‑1
                      AAAAGCGTTGAGGAACAGTGAGAAGCGCAGTGCCCAGCCATCCCGATAC                       >  1:1975609/1‑49
                      AAAAGCGTTGAGGAACAGTGAGAAGCGCAGTGCCCAGCCATCCCGATAC                       >  1:2027083/1‑49
                         AGCGTTGAGGAACAGTGAGAAGCGCAGTGCCCAGCCATCCCGATACTGC                    >  1:1211873/1‑49
                            cTTGAGGAACAATTATAAGCGCAGTGCCCAGCCATCCCGATACTGCTG                  <  1:1724261/47‑1
                               GAGGAACAGTGAGAAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTT               <  1:875683/48‑1
                                  GAACAGTGAGAAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCAC           >  1:1195074/1‑49
                                         GAGAAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCACCAAATCC    >  1:1438173/1‑49
                                         GAGAAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCACCAAATCC    >  1:980179/1‑49
                                          AGAAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCACCAAATCCT   <  1:128690/49‑1
                                          AGAAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCACCAAATCC    <  1:1101025/48‑1
                                           GAAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCACCAAATCCTT  <  1:512705/49‑1
                                                                                            
CCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1627473‑1627517
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCACCAAATCCTT  >  NC_000913/1652762‑1652808

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.