| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,651,293 | Δ2,422 bp | [yhiS]–yhiS | [yhiS], insH‑11, yhiS | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3651293 | 3653714 | 2422 | 51 [0] | [0] 50 | [yhiS]–yhiS | [yhiS],insH‑11,yhiS |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3651292 | 0 (0.000) | 47 (1.810) | 36/92 | 0.0 | 100% | pseudogene (2/746 nt) | yhiS | putative uncharacterized protein YhiS |
| ? | NC_000913 | 3653715 = | 0 (0.000) | intergenic (+2/‑246) | yhiS/slp | putative uncharacterized protein YhiS/starvation lipoprotein | |||||
TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3651243‑3651292‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATG > NC_000913/3653715‑3653761 TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTA < 1:573990/49‑1TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTA > 1:255095/1‑49TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTA > 1:1332679/1‑49 CAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATA > 1:559504/1‑49 CAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATA > 1:1682217/1‑49 CAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATA > 1:207708/1‑49 CAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTAT < 1:1388862/48‑1 AATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATAT > 1:2038767/1‑49 AATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATAT > 1:135962/1‑49 AATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATAT < 1:8888/49‑1 TTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTG < 1:1447183/49‑1 TTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATT > 1:1959330/1‑48 TTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATT > 1:568071/1‑48 TAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGAT > 1:822218/1‑49 AAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGAT > 1:670792/1‑48 AACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTA < 1:1263962/49‑1 AACATCGTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATT < 1:452781/48‑1 CATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATT < 1:882930/49‑1 ATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTA < 1:1033963/49‑1 AGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCA < 1:1423399/47‑1 AGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGC < 1:1307263/46‑1 AGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAG < 1:14153/45‑1 TAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTA > 1:865089/1‑48 TAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTA > 1:275680/1‑48 AAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTAT > 1:912050/1‑48 AAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTAT > 1:1129517/1‑48 AAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAA < 1:1819601/49‑1 CAAATGATGATTAAGGAATTTTATATTGATTATTAGCACTTTATAATCA < 1:893410/49‑1 AATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATT < 1:1105902/49‑1 ATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTG < 1:1041819/49‑1 gGATGAATAAGGAGGGTTATATTGATTATTAGCACTTTATAATCATTGA < 1:438830/48‑1 TGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGA < 1:54702/49‑1 GATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAA > 1:753666/1‑49 GATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAA > 1:728266/1‑49 TGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATA < 1:340676/49‑1 TGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAAT > 1:963338/1‑48 TGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAAT > 1:597865/1‑48 GAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATA > 1:442089/1‑48 AATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAA < 1:524126/49‑1 AATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAA > 1:1954201/1‑48 ATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAA < 1:542167/49‑1 TAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA < 1:1087531/49‑1 TAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA > 1:189753/1‑49 TAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA > 1:631766/1‑49 AGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA > 1:245250/1‑47 AGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA > 1:2098167/1‑47 GGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA > 1:1733828/1‑46 GAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGA < 1:756185/49‑1 ATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATT < 1:1201339/49‑1 TTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTT > 1:94462/1‑49 TATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTA < 1:1008469/48‑1 ATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTAT < 1:386773/48‑1 TATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATG < 1:1856006/48‑1 TATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATG < 1:354407/48‑1 TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3651243‑3651292‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATG > NC_000913/3653715‑3653761 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |