Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 3423693–3424234 3426808–3424653 420–3116 6 [5] [5] 6 [rrfD]–rrlD [rrfD],rrlD

TTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTG  >  NC_000913/3426800‑3426857
         |                                                
tttCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCgt           >  1:705191/1‑49 (MQ=35)
  tCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCgtt          <  1:319039/48‑1 (MQ=38)
    aCTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCgttgtt       >  1:111984/1‑49 (MQ=38)
      ttCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCgttgtt       >  1:2041153/1‑47 (MQ=38)
        cAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCa     <  1:403359/47‑1 (MQ=38)
         agagTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAgtg  <  1:837711/49‑1 (MQ=38)
         |                                                
TTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTG  >  NC_000913/3426800‑3426857

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: