Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_000913 | 2,793,867 | C→A | A378D (GCT→GAT) | gabT → | 4‑aminobutyrate aminotransferase GabT |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 2,793,867 | 0 | C | A | 100.0% | 74.5 / NA | 19 | A378D (GCT→GAT) | gabT | 4‑aminobutyrate aminotransferase GabT |
Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (11/8); total (11/8) |
GGCGATCACAACAAGCCGGACGCCAAACTCACCGCCGAGATCGTGGCTCGCGCCCGCGATAAAGGCCTGATTCTTCTCTCCTGCGGCCCG > NC_000913/2793821‑2793910 | ggCGATCACAACAAGCCGGACGCCAAACTCACCGCCGAGATCGTGGATc < 1:1822106/49‑1 (MQ=255) cGATCACAACAAGCCGGACGCCAAACTCACCGCCGAGATCGTGGATcgc > 1:1370996/1‑49 (MQ=255) gATCACAACAAGCCGGACGCCAAACTCACCGCCGAGATCGTGGATcgcg > 1:1821159/1‑49 (MQ=255) aTCACAACAAGCCGGACGCCAAACTCACCGCCGAGATCGTGGATCgcgc > 1:242997/1‑49 (MQ=255) aaaacaaGCCGGACGCCAAACTCACCGCCGAGATCGTGGATCGCGCCcg < 1:458098/47‑1 (MQ=255) caacaaGCCGGACGCCAAACTCACCGCCGAGATCGTGGATCGCGCCcgc > 1:1411923/1‑49 (MQ=255) acaaGCCGGACGCCAAACTCACCGCCGAGATCGTGGATCGCGCCCGCGa > 1:943120/1‑49 (MQ=255) aaGCCGGACGCCAAACTCACCGCCGAGATCGTGGATCGCGCCCGCGAt > 1:230148/1‑48 (MQ=255) ggACGCCAAACTCACCGCCGAGATCGTGGATCGCGCCCGCGATAAAGGc > 1:1964503/1‑49 (MQ=255) aCGCCAAACTCACCGCCGAGATCGTGGATCGCGCCCGCGATAAAGGCCt < 1:1293990/49‑1 (MQ=255) gCCAAACTCACCGCCGAGATCGTGGATCGCGCCCGCGATAAAGGCCTGa > 1:959691/1‑49 (MQ=255) ccAAACTCACCGCCGAGATCGTGGATCGCGCCCGCGATAAAGGCCTGAt > 1:1462306/1‑49 (MQ=255) aaaCTCACCGCCGAGATCGTGGATCGCGCCCGCGATAAAGGCCTGAttc > 1:954833/1‑49 (MQ=255) cTCACCGCCGAGATCGTGGATCGCGCCCGCGATAAAGGCCTGAttcttc > 1:1341728/1‑49 (MQ=255) gccgAGATCGTGGATCGCGCCCGCGATAAAGGCCTGATTCTTCTCTCCt < 1:708270/49‑1 (MQ=255) ccgAGATCGTGGATCGCGCCCGCGATAAAGGCCTGATTCTTCTCTCCTg < 1:977398/49‑1 (MQ=255) cgAGATCGTGGATCGCGCCCGCGATAAAGGCCTGATTCTTCTCTCCTGc < 1:859345/49‑1 (MQ=255) cgAGATCGTGGATCGCGCCCGCGATAAAGGCCTGATTCTTCTCTCCTGc < 1:125565/49‑1 (MQ=255) gTGGATCGCGCCCGCGATAAAGGCCTGATTCTTCTCTCCTGCGGCCCg < 1:973453/48‑1 (MQ=255) | GGCGATCACAACAAGCCGGACGCCAAACTCACCGCCGAGATCGTGGCTCGCGCCCGCGATAAAGGCCTGATTCTTCTCTCCTGCGGCCCG > NC_000913/2793821‑2793910 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |