Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,829,233	C→A	L97M (CTG→ATG)	xanP →	xanthine:H(+) symporter XanP

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,829,233	0	C	A	100.0%	86.0 / NA	22	L97M (CTG→ATG)	xanP	xanthine:H(+) symporter XanP
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base A (11/11);  total (11/11)

GGCATCGATTATTCAAATTAAGGCCTGGGGTCCGGTTGGCTCCGGGCTGTTGTCTATTCAGGGCACCAGCTTCAACTTTGTTGCCCCGCT  >  NC_000913/3829187‑3829276                                               |                                            ggCATCGATTATTCAAATTAAGGCCTGGGGTCCGGTTGGCTCCGGGAtg                                           >  1:1124317/1‑49 (MQ=255)  gCATCGATTATTCAAATTAAGGCCTGGGGTCCGGTTGGCTCCGGGAtgt                                          >  1:1524189/1‑49 (MQ=255)  gCATCGATTATTCAAATTAAGGCCTGGGGTCCGGTTGGCTCCGGGAtgt                                          >  1:1886226/1‑49 (MQ=255)     tCGATTATTCAAATTAAGGCCTGGGGTCCGGTTGGCTCCGGGAtgttgt                                       >  1:1113967/1‑49 (MQ=255)     tCGATTATTCAAATTAAGGCCTGGGGTCCGGTTGGCTCCGGGAtgttgt                                       <  1:2084825/49‑1 (MQ=255)             tCAAATTAAGGCCTGGGGTCCGGTTGGCTCCGGGATGTTGTCTATTCAg                               >  1:1307772/1‑49 (MQ=255)              cAAATTAAGGCCTGGGGTCCGGTTGGCTCCGGGATGTTGTCTATTCAgg                              >  1:1294057/1‑49 (MQ=255)                      ggCCTGGGGTCCGGTTGGCTCCGGGATGTTGTCTATTCAGGGCACCAGc                      <  1:1712620/49‑1 (MQ=255)                            gggTCCGGTTGGCTCCGGGATGTTGTCTATTCAGGGCACCAGCTTCa                  <  1:1227710/47‑1 (MQ=255)                            gggTCCGGTTGGCTCCGGGATGTTGTCTATTCAGGGCACCAGCTTCa                  <  1:1990882/47‑1 (MQ=255)                             ggTCCGGTTGGCTCCGGGATGTTGTCTATTCAGGGCACCAGCTTCAACt               >  1:1211927/1‑49 (MQ=255)                              gTCCGGTTGGCTCCGGGATGTTGTCTATTCAGGGCACCAGCTTCAACtt              <  1:1651921/49‑1 (MQ=255)                               tCCGGTTGGCTCCGGGATGTTGTCTATTCAGGGCACCAGCTTCAACttt             >  1:1719863/1‑49 (MQ=255)                               tCCGGTTGGCTCCGGGATGTTGTCTATTCAGGGCACCAGCTTCAACttt             <  1:550335/49‑1 (MQ=255)                                  ggTTGGCTCCGGGATGTTGTCTATTCAGGGCACCAGCTTCAACTttgtt          >  1:663901/1‑49 (MQ=255)                                      ggCTCCGGGATGTTGTCTATTCAGGGCACCAGCTTCAACTTTGTTGccc      >  1:1042529/1‑49 (MQ=255)                                      ggCTCCGGGATGTTGTCTATTCAGGGCACCAGCTTCAACTTTGTTGcc       <  1:645171/48‑1 (MQ=255)                                       gCTCCGGGATGTTGTCTATTCAGGGCACCAGCTTCAACTTTGTTGcccc     <  1:89967/49‑1 (MQ=255)                                        cTCCGGGATGTTGTCTATTCAGGGCACCAGCTTCAACTTTGTTGCCCCg    <  1:276115/49‑1 (MQ=255)                                           cGGGATGTTGTCTATTCAGGGCACCAGCTTCAACTTTGTTGCCCCGCt  >  1:1373263/1‑48 (MQ=255)                                           cGGGATGTTGTCTATTCAGGGCACCAGCTTCAACTTTGTTGCCCCGCt  <  1:603370/48‑1 (MQ=255)                                           cGGGATGTTGTCTATTCAGGGCACCAGCTTCAACTTTGTTGCCCCGCt  <  1:940571/48‑1 (MQ=255)                                               |                                            GGCATCGATTATTCAAATTAAGGCCTGGGGTCCGGTTGGCTCCGGGCTGTTGTCTATTCAGGGCACCAGCTTCAACTTTGTTGCCCCGCT  >  NC_000913/3829187‑3829276

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑