Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	1431897	1431953	57	2 [1]	[1] 2	stfR	Rac prophage; putative membrane protein

GCGCACCAATCCCGTGGCCATCAGATACCGTTCCGTCTGGTTATGCCCTGATGCAGGGGCAGGCTTTTGACAAATCTGCTTACCCGAAACTTGCAGCCGCTTATCCGTCAGGCGTGATCCCTGATATGCGTGGCTGGACG  >  NC_000913/1431768‑1431907                                                                                                                                 |            gcgccacAATTCCGTGGCCATCAGATCACGTTCCGTCTTGTTAAGCCCTGGTGCCGGGGCAGGCTTTTGAAAAATCTGCTTACCCGAAACTTGCAGCCGCTTATCCGTCAGGCGTGATCCCTGATATGc             <  1:328533/123‑1 (MQ=14)            ccGGGGCCAGTAGAAACCGTTCCGTTTGGTTATTCCCTTAAGGAGGGGCCGGCTTTTGACAAATCTGCTTACCCGAAACTTGCAGCCGCTTATCCGTCAGGCGTGATCCCTGATATGCGTGGCTGGACg  <  1:600094/129‑1 (MQ=14)                                                                                                                                 |            GCGCACCAATCCCGTGGCCATCAGATACCGTTCCGTCTGGTTATGCCCTGATGCAGGGGCAGGCTTTTGACAAATCTGCTTACCCGAAACTTGCAGCCGCTTATCCGTCAGGCGTGATCCCTGATATGCGTGGCTGGACG  >  NC_000913/1431768‑1431907

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑